ID D0L2B9_GORB4 Unreviewed; 321 AA.
AC D0L2B9;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE SubName: Full=Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:ACY20006.1};
GN OrderedLocusNames=Gbro_0683 {ECO:0000313|EMBL:ACY20006.1};
OS Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198
OS / KCTC 3076 / NBRC 16047 / NCTC 10667) (Rhodococcus bronchialis).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Gordoniaceae;
OC Gordonia.
OX NCBI_TaxID=526226 {ECO:0000313|EMBL:ACY20006.1, ECO:0000313|Proteomes:UP000001219};
RN [1] {ECO:0000313|Proteomes:UP000001219}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 /
RC NBRC 16047 / NCTC 10667 {ECO:0000313|Proteomes:UP000001219};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Ovchinnikova G., Saunders E., Brettin T., Detter J.C., Han C., Larimer F.,
RA Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T.,
RA Wu D., Jando M., Schneider S., Goeker M., Klenk H.-P., Eisen J.A.;
RT "The complete chromosome of Gordonia bronchialis DSM 43247.";
RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACY20006.1, ECO:0000313|Proteomes:UP000001219}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 /
RC NBRC 16047 / NCTC 10667 {ECO:0000313|Proteomes:UP000001219};
RX PubMed=21304674;
RA Ivanova N., Sikorski J., Jando M., Lapidus A., Nolan M., Lucas S.,
RA Del Rio T.G., Tice H., Copeland A., Cheng J.F., Chen F., Bruce D.,
RA Goodwin L., Pitluck S., Mavromatis K., Ovchinnikova G., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P.,
RA Saunders E., Han C., Detter J.C., Brettin T., Rohde M., Goker M.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of Gordonia bronchialis type strain (3410).";
RL Stand. Genomic Sci. 2:19-28(2010).
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DR EMBL; CP001802; ACY20006.1; -; Genomic_DNA.
DR RefSeq; WP_012832593.1; NC_013441.1.
DR AlphaFoldDB; D0L2B9; -.
DR STRING; 526226.Gbro_0683; -.
DR KEGG; gbr:Gbro_0683; -.
DR eggNOG; COG2378; Bacteria.
DR HOGENOM; CLU_041141_5_0_11; -.
DR OrthoDB; 3171994at2; -.
DR Proteomes; UP000001219; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF6; HTH DEOR-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001219};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..61
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 321 AA; 35709 MW; 3D76D4BA3F8A6103 CRC64;
MRADRLVSLV LLLRQRDRIT ADQLASALEV STRTVLRDID ALSTAGVPVY ADRGRYGGYS
LLPGFRTELT GLNHDEALAL LTAGSSRGEK VFGLSAPLAS AMRKVVDALP EGHQVSLGDA
AKRFLVEPET DLLSRRAPTE DLADGVMSEV RAAVLTGRRL RFNYAAPGKA PSRRTVDPIG
LVTVRGRTYL LATRSGDDRT YRLSRMLRAE ALPEPAQRPA QVDLDRIWAE RTAQFLSENH
IPVVVRIKTS RREELLENAS AVRAEEPEPD DWIRLDVTFE DLRHAVWAVW RLDTDAEVLA
PDSVRDAMYV RAEALTARYR S
//
