ID D0L6W5_GORB4 Unreviewed; 363 AA.
AC D0L6W5;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Transposase {ECO:0000313|EMBL:ACY23675.1};
GN OrderedLocusNames=Gbro_4542 {ECO:0000313|EMBL:ACY23675.1};
OS Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198
OS / KCTC 3076 / NBRC 16047 / NCTC 10667) (Rhodococcus bronchialis).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Gordoniaceae;
OC Gordonia.
OX NCBI_TaxID=526226 {ECO:0000313|EMBL:ACY23675.1, ECO:0000313|Proteomes:UP000001219};
RN [1] {ECO:0000313|Proteomes:UP000001219}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 /
RC NBRC 16047 / NCTC 10667 {ECO:0000313|Proteomes:UP000001219};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA Ovchinnikova G., Saunders E., Brettin T., Detter J.C., Han C., Larimer F.,
RA Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T.,
RA Wu D., Jando M., Schneider S., Goeker M., Klenk H.-P., Eisen J.A.;
RT "The complete chromosome of Gordonia bronchialis DSM 43247.";
RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACY23675.1, ECO:0000313|Proteomes:UP000001219}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 /
RC NBRC 16047 / NCTC 10667 {ECO:0000313|Proteomes:UP000001219};
RX PubMed=21304674;
RA Ivanova N., Sikorski J., Jando M., Lapidus A., Nolan M., Lucas S.,
RA Del Rio T.G., Tice H., Copeland A., Cheng J.F., Chen F., Bruce D.,
RA Goodwin L., Pitluck S., Mavromatis K., Ovchinnikova G., Pati A., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P.,
RA Saunders E., Han C., Detter J.C., Brettin T., Rohde M., Goker M.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of Gordonia bronchialis type strain (3410).";
RL Stand. Genomic Sci. 2:19-28(2010).
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DR EMBL; CP001802; ACY23675.1; -; Genomic_DNA.
DR RefSeq; WP_012836160.1; NC_013441.1.
DR AlphaFoldDB; D0L6W5; -.
DR STRING; 526226.Gbro_4542; -.
DR KEGG; gbr:Gbro_4542; -.
DR eggNOG; COG3335; Bacteria.
DR eggNOG; COG3415; Bacteria.
DR HOGENOM; CLU_041125_0_0_11; -.
DR OrthoDB; 2375382at2; -.
DR Proteomes; UP000001219; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR038717; Tc1-like_DDE_dom.
DR InterPro; IPR047655; Transpos_IS630-like.
DR NCBIfam; NF033545; transpos_IS630; 1.
DR PANTHER; PTHR30347:SF1; MINICONDUCTANCE MECHANOSENSITIVE CHANNEL MSCM; 1.
DR PANTHER; PTHR30347; POTASSIUM CHANNEL RELATED; 1.
DR Pfam; PF13358; DDE_3; 1.
DR Pfam; PF13565; HTH_32; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001219};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 175..320
FT /note="Tc1-like transposase DDE"
FT /evidence="ECO:0000259|Pfam:PF13358"
SQ SEQUENCE 363 AA; 41467 MW; 946F9EE1121B7779 CRC64;
MATRGPRAVD IVLTDDERRE LEGWARRRTT ASGLAMRSRI VLAAADGGSN TEVAQRLGLN
RGTVRRWRGR FVEHRCEGLL DEPRPGRPRT VDDEQIKDLI TATLETTPKN ATHWSTRLMA
EHLDMSQSTV SRVWRAFGLA PHKQDSWKLS KDPMFTEKVR DVVGLYMNPP ERALVLCVDE
KTQIQALDRT QPIFPMLPGT PQRASHDYVR NGTSSLYAAL DIASGKVIGS LHSRHRATEF
IGFLRKIDAE VPDELDVHLV MDNASTHKTP AVKRWLTSHP RFVVHFTPTS SSWMNLVERW
FAELTTKKLQ RSTHRTVRAL NADIRAWIET WNDNPRPYVW VKTADQILDS IAHYCTRIND
SEH
//
