ID   D0LHL3_HALO1            Unreviewed;       576 AA.
AC   D0LHL3;
DT   15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT   15-DEC-2009, sequence version 1.
DT   27-MAR-2024, entry version 73.
DE   SubName: Full=Sigma 54 interacting domain protein {ECO:0000313|EMBL:ACY12875.1};
GN   OrderedLocusNames=Hoch_0234 {ECO:0000313|EMBL:ACY12875.1};
OS   Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).
OC   Bacteria; Myxococcota; Polyangia; Haliangiales; Kofleriaceae; Haliangium.
OX   NCBI_TaxID=502025 {ECO:0000313|EMBL:ACY12875.1, ECO:0000313|Proteomes:UP000001880};
RN   [1] {ECO:0000313|EMBL:ACY12875.1, ECO:0000313|Proteomes:UP000001880}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 14365 / CIP 107738 / JCM 11303 / AJ 13395 / SMP-2
RC   {ECO:0000313|Proteomes:UP000001880};
RX   PubMed=21304682; DOI=10.4056/sigs.69.1277;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A.,
RA   Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F.,
RA   Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K., Pati A.,
RA   Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA   Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J.,
RA   Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Haliangium ochraceum type strain (SMP-2).";
RL   Stand. Genomic Sci. 2:96-106(2010).
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DR   EMBL; CP001804; ACY12875.1; -; Genomic_DNA.
DR   RefSeq; WP_012825502.1; NC_013440.1.
DR   AlphaFoldDB; D0LHL3; -.
DR   STRING; 502025.Hoch_0234; -.
DR   KEGG; hoh:Hoch_0234; -.
DR   eggNOG; COG4650; Bacteria.
DR   HOGENOM; CLU_039506_0_0_7; -.
DR   OrthoDB; 9770562at2; -.
DR   Proteomes; UP000001880; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR009715; RtcR.
DR   InterPro; IPR017183; Sigma54_dep_tscrpt_act_RtcR.
DR   InterPro; IPR002078; Sigma_54_int.
DR   NCBIfam; NF038308; RNA_repair_RtcR; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   PANTHER; PTHR32071:SF14; TRANSCRIPTIONAL REGULATORY PROTEIN RTCR; 1.
DR   Pfam; PF06956; RtcR; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PIRSF; PIRSF037354; Txn_actvtr_RtcR; 2.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001880}.
FT   DOMAIN          189..426
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
FT   REGION          453..499
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        455..469
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        470..499
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   576 AA;  64794 MW;  2C7F39D4B8ED9CF6 CRC64;
     MRSSGKRLVV IGLLGSTLDR GGRGARRWDK WRPSVALCRH EDLLVDRLEL LHMPAHQRLL
     HTVRGDIAQV SPETEVRPHA LDLRDAWDFE EVFAALHEFA RAYEFRPDSE DYLVHITTGT
     HVAQICLFLL TESRHLPARL LQTSPPGPEH RGEPGRYAII DLDLSRYDRL ASRFRQEQQD
     RVSFLKSGID TRSPAFNALI ERVERVALRS RAPILLSGPT GAGKSQLARQ IYELRRARRQ
     LEGAFVEVNC ATLRGDAAMS ALFGHVRGAY TGASRDRAGL LRQADRGMLF LDEIGELGGD
     EQAMLLRAIE DKRFVPVGGD REAASDFQLI AGSNRDLERA VAQGRFREDL LARIDTWWFR
     LPALRERPED IEPNLDYELA QWTQRQGTRV TFNREARARF LHFASGEATW PGNFRDFNAA
     ITRMATLASG GRITIADVDD ELSRLRARWQ HAIPAASPQP PPSPPTPDHP SENHTVSENA
     SIDRSSPEHA QQTTNPSWPR ARAALGDEAL AALDRFERAQ LEDVLGVCAL SDSLSEAGRA
     LFAVSRARKQ RPNDADRLRK YLARHGLSWS QLSTER
//