ID D0LLF6_HALO1 Unreviewed; 609 AA.
AC D0LLF6;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=RNA binding S1 domain protein {ECO:0000313|EMBL:ACY13173.1};
GN OrderedLocusNames=Hoch_0535 {ECO:0000313|EMBL:ACY13173.1};
OS Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).
OC Bacteria; Myxococcota; Polyangia; Haliangiales; Kofleriaceae; Haliangium.
OX NCBI_TaxID=502025 {ECO:0000313|EMBL:ACY13173.1, ECO:0000313|Proteomes:UP000001880};
RN [1] {ECO:0000313|EMBL:ACY13173.1, ECO:0000313|Proteomes:UP000001880}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14365 / CIP 107738 / JCM 11303 / AJ 13395 / SMP-2
RC {ECO:0000313|Proteomes:UP000001880};
RX PubMed=21304682; DOI=10.4056/sigs.69.1277;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Ivanova N., Daum C., Lang E., Abt B., Kopitz M., Saunders E., Lapidus A.,
RA Lucas S., Glavina Del Rio T., Nolan M., Tice H., Copeland A., Cheng J.F.,
RA Chen F., Bruce D., Goodwin L., Pitluck S., Mavromatis K., Pati A.,
RA Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Detter J.C., Brettin T., Rohde M., Goker M., Bristow J.,
RA Markowitz V., Eisen J.A., Hugenholtz P., Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Haliangium ochraceum type strain (SMP-2).";
RL Stand. Genomic Sci. 2:96-106(2010).
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DR EMBL; CP001804; ACY13173.1; -; Genomic_DNA.
DR AlphaFoldDB; D0LLF6; -.
DR KEGG; hoh:Hoch_0535; -.
DR eggNOG; COG0539; Bacteria.
DR HOGENOM; CLU_448175_0_0_7; -.
DR Proteomes; UP000001880; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000001880}.
FT DOMAIN 406..479
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..406
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 463..591
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 291..357
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 10..41
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 482..504
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 544..591
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 609 AA; 65079 MW; 11F6B1EADDE051F7 CRC64;
MENVSTRDEE QNQSESAQAA PASTESPAAE SATSESADAA SLQADESAAE AAEGGEAGAS
SAENESQAAE GGEAAEGGDA AEGGKAPLRK SRSRGGRRGG RGSGGGGQND PTPELLKLVD
LSVKFPDIGP ALAELAFKLG NSEIGERVLS MGLSSDRPGL EFYFVAAHAA RRERRYEDAL
RASIDAVRAY ADAADDAIAA DDAQRLLHLV RLGFNTLMFE IGDVEKHPWF TRDLIAELTR
AEPRLGEDSF FRSLLAQALW FEDRERSEAE WQRAHELGAP ETTWNARGTW YREAENDLVK
AEEAYRKGLE AASDSALLNH NLAQVLIDRA RGLEDDKEQV KALLQEAETL LRDALREDGP
KGLRRHIHAT RDRLFELRRA VVPRSRRRGG KKEADAPVNK EPPAVGDTVQ GRVRSVAAFG
AFVVLPSGHV GLVHKSELRT GQVNDATEEV NVGDEFEVKV LDVSPDGDSN RLRIGLSRRV
LMPGGDKERE RERAKGDERG KGGGRGRGGG GGRGGGERGK SGGGGGGGGG GGRGRGAGER
GKGGGGRGPR RGGGDEPRGA RDDGDRRPRR DGDDRRSPRE SEADRKKQEK LASLGEMLLA
KMNEDDSKS
//
