ID D0P0N4_PHYIT Unreviewed; 480 AA.
AC D0P0N4;
DT 15-DEC-2009, integrated into UniProtKB/TrEMBL.
DT 15-DEC-2009, sequence version 1.
DT 24-JAN-2024, entry version 65.
DE SubName: Full=tRNA-dihydrouridine synthase, putative {ECO:0000313|EMBL:EEY53001.1};
GN ORFNames=PITG_19868 {ECO:0000313|EMBL:EEY53001.1};
OS Phytophthora infestans (strain T30-4) (Potato late blight agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=403677 {ECO:0000313|EMBL:EEY53001.1, ECO:0000313|Proteomes:UP000006643};
RN [1] {ECO:0000313|Proteomes:UP000006643}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T30-4 {ECO:0000313|Proteomes:UP000006643};
RX PubMed=19741609; DOI=10.1038/nature08358;
RG The Broad Institute Genome Sequencing Platform;
RA Haas B.J., Kamoun S., Zody M.C., Jiang R.H., Handsaker R.E., Cano L.M.,
RA Grabherr M., Kodira C.D., Raffaele S., Torto-Alalibo T., Bozkurt T.O.,
RA Ah-Fong A.M., Alvarado L., Anderson V.L., Armstrong M.R., Avrova A.,
RA Baxter L., Beynon J., Boevink P.C., Bollmann S.R., Bos J.I., Bulone V.,
RA Cai G., Cakir C., Carrington J.C., Chawner M., Conti L., Costanzo S.,
RA Ewan R., Fahlgren N., Fischbach M.A., Fugelstad J., Gilroy E.M., Gnerre S.,
RA Green P.J., Grenville-Briggs L.J., Griffith J., Grunwald N.J., Horn K.,
RA Horner N.R., Hu C.H., Huitema E., Jeong D.H., Jones A.M., Jones J.D.,
RA Jones R.W., Karlsson E.K., Kunjeti S.G., Lamour K., Liu Z., Ma L.,
RA Maclean D., Chibucos M.C., McDonald H., McWalters J., Meijer H.J.,
RA Morgan W., Morris P.F., Munro C.A., O'Neill K., Ospina-Giraldo M.,
RA Pinzon A., Pritchard L., Ramsahoye B., Ren Q., Restrepo S., Roy S.,
RA Sadanandom A., Savidor A., Schornack S., Schwartz D.C., Schumann U.D.,
RA Schwessinger B., Seyer L., Sharpe T., Silvar C., Song J., Studholme D.J.,
RA Sykes S., Thines M., van de Vondervoort P.J., Phuntumart V., Wawra S.,
RA Weide R., Win J., Young C., Zhou S., Fry W., Meyers B.C., van West P.,
RA Ristaino J., Govers F., Birch P.R., Whisson S.C., Judelson H.S.,
RA Nusbaum C.;
RT "Genome sequence and analysis of the Irish potato famine pathogen
RT Phytophthora infestans.";
RL Nature 461:393-398(2009).
CC -!- COFACTOR:
CC Name=FMN; Xref=ChEBI:CHEBI:58210;
CC Evidence={ECO:0000256|ARBA:ARBA00001917};
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DR EMBL; DS028222; EEY53001.1; -; Genomic_DNA.
DR RefSeq; XP_002896129.1; XM_002896083.1.
DR AlphaFoldDB; D0P0N4; -.
DR STRING; 403677.D0P0N4; -.
DR EnsemblProtists; PITG_19868T0; PITG_19868T0; PITG_19868.
DR GeneID; 9466972; -.
DR KEGG; pif:PITG_19868; -.
DR VEuPathDB; FungiDB:PITG_19868; -.
DR eggNOG; KOG2334; Eukaryota.
DR HOGENOM; CLU_013299_3_0_1; -.
DR InParanoid; D0P0N4; -.
DR OMA; QDVKLHY; -.
DR OrthoDB; 276273at2759; -.
DR Proteomes; UP000006643; Partially assembled WGS sequence.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd02801; DUS_like_FMN; 1.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR035587; DUS-like_FMN-bd.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR018517; tRNA_hU_synthase_CS.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45936; TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE; 1.
DR PANTHER; PTHR45936:SF1; TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE; 1.
DR Pfam; PF01207; Dus; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF51395; FMN-linked oxidoreductases; 1.
DR PROSITE; PS01136; UPF0034; 1.
PE 4: Predicted;
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW FMN {ECO:0000256|ARBA:ARBA00022643};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000006643};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 384..418
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 342..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 448..480
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 365..379
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..470
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 480 AA; 53187 MW; 363CDD331ED9748C CRC64;
MSELYANKVC LSPMVRSGTL PLRLLSLRYG ADLVYGEEII DKRIISAVRV PNDVVNAVDF
VSRNGDSVVF RTCSEEAGKV VFQIGTADAV LALKAAEAVA RDVAAVDINM GCPKHFSVQG
GMGAALLRKP EVACDIMKTL RRNLNIPVSC KIRLLPEIQD TVDLARRLED AGACAVGVHM
RQTHERPHDK ASWDRLAPVV SALSVPVLAN GDVFMHEDIN KLRKLSGASS FLIARGALAN
PSIFRKEGRL PIDQVVREYL KAAAEVDNVF QNTKYNVMRM IPSSLEDAYA SGNKYGYAKD
AHVVTVPDLA ATRNGLQMYS LWDLQNYYNQ YQDQFRAKAT ALEKSKNTED PTSETLTTLP
GAHDRYAENT EREAPKARNN ITGKSELFCE TCKIQLLSEQ DVKLHYKGRK HKNVLRRQTS
ATISKFVAKA QVEQNPATGE SRKVVAEIRQ HEGEDKRDVK RTKLEDTTAV ANDRALKSTS
//