ID D0WE02_SLAES Unreviewed; 508 AA.
AC D0WE02;
DT 19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT 19-JAN-2010, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EEZ61940.1};
GN ORFNames=HMPREF0762_00026 {ECO:0000313|EMBL:EEZ61940.1};
OS Slackia exigua (strain ATCC 700122 / DSM 15923 / CIP 105133 / JCM 11022 /
OS KCTC 5966 / S-7).
OC Bacteria; Actinomycetota; Coriobacteriia; Eggerthellales; Eggerthellaceae;
OC Slackia.
OX NCBI_TaxID=649764 {ECO:0000313|EMBL:EEZ61940.1, ECO:0000313|Proteomes:UP000006001};
RN [1] {ECO:0000313|EMBL:EEZ61940.1, ECO:0000313|Proteomes:UP000006001}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700122 / DSM 15923 / CIP 105133 / JCM 11022 / KCTC 5966 /
RC S-7 {ECO:0000313|Proteomes:UP000006001};
RA Weinstock G., Sodergren E., Clifton S., Fulton L., Fulton B., Courtney L.,
RA Fronick C., Harrison M., Strong C., Farmer C., Delahaunty K., Markovic C.,
RA Hall O., Minx P., Tomlinson C., Mitreva M., Nelson J., Hou S., Wollam A.,
RA Pepin K.H., Johnson M., Bhonagiri V., Nash W.E., Warren W., Chinwalla A.,
RA Mardis E.R., Wilson R.K.;
RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEZ61940.1}.
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DR EMBL; ACUX02000004; EEZ61940.1; -; Genomic_DNA.
DR AlphaFoldDB; D0WE02; -.
DR STRING; 649764.HMPREF0762_00026; -.
DR eggNOG; COG1376; Bacteria.
DR HOGENOM; CLU_022707_2_1_11; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000006001; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 3.10.20.800; -; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR038054; LD_TPept-like_central_sf.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR InterPro; IPR022029; YoaR-like_PG-bd.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF2; SLL0670 PROTEIN; 1.
DR Pfam; PF12229; PG_binding_4; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF143985; L,D-transpeptidase pre-catalytic domain-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006001};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 43..65
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 288..352
FT /note="YoaR-like putative peptidoglycan binding"
FT /evidence="ECO:0000259|Pfam:PF12229"
FT DOMAIN 377..506
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 508 AA; 53738 MW; 0CA802A664A4772E CRC64;
MESVAPRPSR GAHAAPDADF LTDRASSFVP QSTAQERRGL KPAVVAAIVA FAIILIAYVI
GAFYFSTHFF PRTTMGSLDV SGMSQIEAQQ VVEDAEKTYT LSVSGMGLSF SMTPSDGGMG
VDPADVVSNA LAQERALLWP IAILRSHDVT DALVATVDGG KLGDFIESKV DAYNASQTPS
ADAYVAYDSS KKSFAVMPET YGTQMSSDAV IAKAASAIGS FEGEVKLDDD DLIKPEVRSD
DKGLAASAKS ANDLLGAEGD IVFGTTGVKV ATIDADIVSQ FVVFGSDGTA SIDNDAVSAW
VSDFASSLST VGTTRTFTRG DGESVTASGG DYGWAVSSDA AAEAIEEFIL DKSRGQLTLD
ATQSGNGYVS ANQDWGAYVD VDLTEQHARY YDAKGDLQWE SDFISGSPKH STPTGIYYLK
ALQRHQTLIG KPDPETKKPE YETPVDYWMP FIGNAVGFHD APWQSSAAFA DPAGYTYTGS
HGCINLPPDK AKDLFGILKV GDAVVVHS
//
