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Database: UniProt
Entry: D0YXA8_PHODD
LinkDB: D0YXA8_PHODD
Original site: D0YXA8_PHODD 
ID   D0YXA8_PHODD            Unreviewed;       754 AA.
AC   D0YXA8;
DT   19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT   19-JAN-2010, sequence version 1.
DT   24-JAN-2024, entry version 69.
DE   SubName: Full=ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EEZ40621.1};
GN   ORFNames=VDA_001648 {ECO:0000313|EMBL:EEZ40621.1};
OS   Photobacterium damselae subsp. damselae CIP 102761.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=675817 {ECO:0000313|EMBL:EEZ40621.1, ECO:0000313|Proteomes:UP000003579};
RN   [1] {ECO:0000313|EMBL:EEZ40621.1, ECO:0000313|Proteomes:UP000003579}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CIP 102761 {ECO:0000313|EMBL:EEZ40621.1,
RC   ECO:0000313|Proteomes:UP000003579};
RG   Los Alamos National Laboratory (LANL);
RG   National Microbial Pathogen Data Resource (NMPDR);
RA   Munk A.C., Tapia R., Green L., Rogers Y., Detter J.C., Bruce D.,
RA   Brettin T.S., Colwell R., Huq A., Grim C.J., Hasan N.A., Vonstein V.,
RA   Bartels D.;
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; ADBS01000001; EEZ40621.1; -; Genomic_DNA.
DR   RefSeq; WP_005298439.1; NZ_ADBS01000001.1.
DR   AlphaFoldDB; D0YXA8; -.
DR   GeneID; 57342269; -.
DR   eggNOG; COG0542; Bacteria.
DR   Proteomes; UP000003579; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR   GO; GO:0043335; P:protein unfolding; IEA:InterPro.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR013461; ClpA.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR02639; ClpA; 1.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF111; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 1.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS51903; CLP_R; 1.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Hydrolase {ECO:0000313|EMBL:EEZ40621.1};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:EEZ40621.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003579};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW   ProRule:PRU01251}.
FT   DOMAIN          1..145
FT                   /note="Clp R"
FT                   /evidence="ECO:0000259|PROSITE:PS51903"
FT   REGION          143..166
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        143..160
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   754 AA;  83632 MW;  88A59C26ADEE5308 CRC64;
     MLNKELEASL NGAFARAREK RHEFMTVEHL LLALIDNAAA QEALLACRAD LDQLRKELHS
     FIDQTTPLIP EDDTGRETQP TLSFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESHA
     AYLLKKSDIT RLDVVNFISH GTVKDSVNDN SPSESANQDE TRIEQSSEDK LENFATNLNN
     LAKAGGIDPL IGRDQELERT IQVLCRRRKN NPLLVGEAGV GKTAIAEGLA WRIVEGQVPD
     VIKDCVIYSL DIGSLLAGTK YRGDFEKRFK GILKQLEKED HAIMFIDEIH TIIGAGAASG
     GQVDAANLIK PLLSSGKLRC MGSTTYQEYS NIFEKERALS RRFQKIDVVE PSIDDTTKIL
     MGLKPKYEAH HEVRFTNKAI RAAVELSAKY INERHLPDKA IDVIDEAGAR CRLAPASRRK
     KTINVSDIEA MIAKMARIPE KSVSSSDRDV LQSLDSKLKM LVFGQDDAID VLTEAIKLSR
     AGLGADNKPV GSFLFAGPTG VGKTEVTVQL ARTLGIDLLR FDMSEYMERH TVSRLIGAPP
     GYVGYDQGGL LTDAVIKNPH SVVLLDEIEK AHPDVFNLLL QVMDNGTLTD NNGRKADFRN
     VILVMTTNAG VTETTRKSIG LIQQDHSHDA MAEIKRVFTP EFRNRLDGII WFNHLEKEVI
     SQVVDKFIVE LQAQLDARGV SMEVTDRARE WMADKGYDKA MGARPMARVI QDSLKKPLAN
     ELLFGELVNG GSVRVDLIND QLDFQFSSEM EAAH
//
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