ID D1BFR2_SANKS Unreviewed; 916 AA.
AC D1BFR2;
DT 19-JAN-2010, integrated into UniProtKB/TrEMBL.
DT 19-JAN-2010, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192};
DE EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};
GN OrderedLocusNames=Sked_14870 {ECO:0000313|EMBL:ACZ21423.1};
OS Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Sanguibacteraceae;
OC Sanguibacter.
OX NCBI_TaxID=446469 {ECO:0000313|EMBL:ACZ21423.1, ECO:0000313|Proteomes:UP000000322};
RN [1] {ECO:0000313|EMBL:ACZ21423.1, ECO:0000313|Proteomes:UP000000322}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74
RC {ECO:0000313|Proteomes:UP000000322};
RX PubMed=21304646;
RA Ivanova N., Sikorski J., Sims D., Brettin T., Detter J.C., Han C.,
RA Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S.,
RA Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A.,
RA Mavromatis K., Chen A., Palaniappan K., D'haeseleer P., Chain P.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Goker M., Pukall R.,
RA Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Sanguibacter keddieii type strain (ST-74).";
RL Stand. Genomic Sci. 1:110-118(2009).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=The enzyme specifically hydrolyzes (1->4)-beta-D-galactosidic
CC linkages in type I arabinogalactans.; EC=3.2.1.89;
CC Evidence={ECO:0000256|RuleBase:RU361192};
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 53 family.
CC {ECO:0000256|ARBA:ARBA00010687, ECO:0000256|RuleBase:RU361192}.
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DR EMBL; CP001819; ACZ21423.1; -; Genomic_DNA.
DR AlphaFoldDB; D1BFR2; -.
DR STRING; 446469.Sked_14870; -.
DR CAZy; CBM61; Carbohydrate-Binding Module Family 61.
DR CAZy; GH53; Glycoside Hydrolase Family 53.
DR KEGG; ske:Sked_14870; -.
DR eggNOG; COG3867; Bacteria.
DR HOGENOM; CLU_011259_1_1_11; -.
DR Proteomes; UP000000322; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0031218; F:arabinogalactan endo-1,4-beta-galactosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0015926; F:glucosidase activity; IEA:InterPro.
DR GO; GO:0008152; P:metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1270.90; AF1782-like; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR011081; Big_4.
DR InterPro; IPR011683; Glyco_hydro_53.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR PANTHER; PTHR34983; ARABINOGALACTAN ENDO-BETA-1,4-GALACTANASE A; 1.
DR PANTHER; PTHR34983:SF2; ENDO-BETA-1,4-GALACTANASE; 1.
DR Pfam; PF07532; Big_4; 1.
DR Pfam; PF07745; Glyco_hydro_53; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|RuleBase:RU361192};
KW Hydrolase {ECO:0000256|RuleBase:RU361192};
KW Membrane {ECO:0000256|SAM:Phobius}; Signal {ECO:0000256|RuleBase:RU361192};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..33
FT /evidence="ECO:0000256|RuleBase:RU361192"
FT CHAIN 34..916
FT /note="Arabinogalactan endo-beta-1,4-galactanase"
FT /evidence="ECO:0000256|RuleBase:RU361192"
FT /id="PRO_5005126070"
FT TRANSMEM 885..905
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 438..492
FT /note="Bacterial Ig-like"
FT /evidence="ECO:0000259|Pfam:PF07532"
FT REGION 721..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 844..877
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 724..751
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 916 AA; 95381 MW; DF8A0843E1221C60 CRC64;
MHPPRRRLPL RLAAAATAGA VLLTPLVTTS AVAADDPTGP VEAGIVVDKV EGLPEDFING
VDISSILALE KSGVTFQDWD GQQADIFEVL ADADVNYVRV RVWNDPYDAQ GNGYGGGDND
IAAAVAIGER ATAHGMRLLV DFHYSDFWAD PAKQQAPKAW AEMTVDQKAD ATEAYTADAL
TQLRDANVDV GMVQVGNETN NSVAGVTGWA GMSQIFSAGS SAVRTVYPDA LVAVHFTNPE
RAGSYANIAR QLDTHGVDYD VFASSYYPFW HGSLSNLTTV LDQVATTYDK QVMVAETSWN
YTLEDGDGHE NTIKPTSGFT QYPSSVQGQA TAVRDVMQAV TDVGPEGIGV FYWEPAWLPV
GPPEELAQNK LLWEEHGSGW ASSYAAEYDP EDAGEWYGGS SWDNQALFDF QGAPLESLRV
FQYARTGATA PREVVDVEKV TLTVPDGSPV TLPATVRVTY NDGSTEDRPV TWSTSVDWIR
GPGAYTVSGT TADGARVTAT VTVSAVNHVA NPSFEDATAA PWTITGTGAS VAADADASDG
ARSLKFWSAT PYTFAVEQTI TGVPAGTYRL SATSQGALAG PTDTRTLSAT TAEGEQSAPI
TLDGWRAFST ATVDDVVVGE DGLVTVAARY SLSGAAWGNL DDVRLTRVES TTTVDTAALE
QSLQTARTVD RTLWTPASLA TLDVAVESAE VLLSGSRATQ EDVDAVTALV DAAVAGLEAI
DTTPPVDPEP PVTPQPPVTP EPPVTPEPPV TPEPVTPVMT LSSGSVTAGD DVTVTVTGLD
LPEVEIGIES EYQRLASATV VDGAATVTVT VPATLEAGTH SLQARDADGA VLAQAAVEVL
AAPVATPTPG EPGTDAPTTP APGVPSSGAP AAGGTGTLSE TGADVALLAG LTTMLVAAGS
AVLVLRRRRA GTSTLR
//