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Database: UniProt
Entry: D1W1Z8_9BACT
LinkDB: D1W1Z8_9BACT
Original site: D1W1Z8_9BACT 
ID   D1W1Z8_9BACT            Unreviewed;       169 AA.
AC   D1W1Z8;
DT   09-FEB-2010, integrated into UniProtKB/TrEMBL.
DT   09-FEB-2010, sequence version 1.
DT   24-JAN-2024, entry version 59.
DE   SubName: Full=Sigma-70 region 2 {ECO:0000313|EMBL:EFA96682.1};
GN   ORFNames=HMPREF9019_0435 {ECO:0000313|EMBL:EFA96682.1};
OS   Hoylesella timonensis CRIS 5C-B1.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC   Hoylesella.
OX   NCBI_TaxID=679189 {ECO:0000313|EMBL:EFA96682.1, ECO:0000313|Proteomes:UP000004001};
RN   [1] {ECO:0000313|EMBL:EFA96682.1, ECO:0000313|Proteomes:UP000004001}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CRIS 5C-B1 {ECO:0000313|EMBL:EFA96682.1,
RC   ECO:0000313|Proteomes:UP000004001};
RA   Durkin A.S., Madupu R., Torralba M., Methe B., Sutton G., Strausberg R.L.,
RA   Nelson K.E.;
RT   "Genome Sequence of Prevotella timonensis CRIS 5C-B1.";
RL   Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFA96682.1}.
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DR   EMBL; ADEF01000066; EFA96682.1; -; Genomic_DNA.
DR   RefSeq; WP_008125880.1; NZ_ADEF01000066.1.
DR   AlphaFoldDB; D1W1Z8; -.
DR   eggNOG; COG1595; Bacteria.
DR   Proteomes; UP000004001; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   PANTHER; PTHR43133:SF46; RNA POLYMERASE SIGMA FACTOR SIGY; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000004001}.
FT   DOMAIN          10..73
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          115..157
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   169 AA;  20256 MW;  7D7DC80DAF0E260C CRC64;
     MTDRKQLASL FKQHYREMYR LASIMLHDDA ESKDIVHDVF AYILESGKDL KADTAVAYLM
     TSVRNRCLNH IRNMEIQERV ERLYLLDQEL EQCQEPRKLE EEIKALEKEL ERIQPPRCRE
     ILLMHYHVKR TFKEIAQMMG ISETAVYKHL RHAMKQLREQ LKKGRNGKD
//
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