ID   D2Q6V3_BIFDB            Unreviewed;       596 AA.
AC   D2Q6V3;
DT   02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT   02-MAR-2010, sequence version 1.
DT   27-MAR-2024, entry version 63.
DE   SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:ADB10644.1};
GN   OrderedLocusNames=BDP_2077 {ECO:0000313|EMBL:ADB10644.1};
OS   Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1).
OC   Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC   Bifidobacteriaceae; Bifidobacterium.
OX   NCBI_TaxID=401473 {ECO:0000313|EMBL:ADB10644.1, ECO:0000313|Proteomes:UP000008693};
RN   [1] {ECO:0000313|EMBL:ADB10644.1, ECO:0000313|Proteomes:UP000008693}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 27534 / DSM 20436 / JCM 1195 / Bd1
RC   {ECO:0000313|Proteomes:UP000008693};
RX   PubMed=20041198; DOI=10.1371/journal.pgen.1000785;
RA   Ventura M., Turroni F., Zomer A., Foroni E., Giubellini V., Bottacini F.,
RA   Canchaya C., Claesson M.J., He F., Mantzourani M., Mulas L., Ferrarini A.,
RA   Gao B., Delledonne M., Henrissat B., Coutinho P., Oggioni M., Gupta R.S.,
RA   Zhang Z., Beighton D., Fitzgerald G.F., O'Toole P.W., van Sinderen D.;
RT   "The Bifidobacterium dentium Bd1 genome sequence reflects its genetic
RT   adaptation to the human oral cavity.";
RL   PLoS Genet. 5:E1000785-E1000785(2009).
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DR   EMBL; CP001750; ADB10644.1; -; Genomic_DNA.
DR   RefSeq; WP_003838486.1; NC_013714.1.
DR   AlphaFoldDB; D2Q6V3; -.
DR   STRING; 401473.BDP_2077; -.
DR   GeneID; 69535837; -.
DR   KEGG; bde:BDP_2077; -.
DR   eggNOG; COG0568; Bacteria.
DR   HOGENOM; CLU_439839_0_0_11; -.
DR   Proteomes; UP000008693; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008693}.
FT   DOMAIN          122..166
FT                   /note="RNA polymerase sigma-70 region 4"
FT                   /evidence="ECO:0000259|Pfam:PF04545"
SQ   SEQUENCE   596 AA;  67719 MW;  24CD35A0210B1946 CRC64;
     MRSKENGTLN ESDLFGDANS DLMSNLKKIT DWKKTHGKGN EGPFLVLYDS KMPIDIKQAV
     NRLNAFTYDN LPMDEIGFST ELFESLEDLD DYIPIEDGDS DEDEEPIQLD NFPLALSSAI
     CDLDEREYKI FNERFLMEEP RSFKAIGGDL GITRERIRQI EKNLRDRMQP VFDEFSIDEK
     LSSLFTNDKK FIRSSRLDTV FPEFEKYLPN STTPVKWVLR NYCRFTYEEK DGWLATPSIL
     EAKRLFKDKL GRQASRHGVL NKDVLPAFET YDNELADIID WAKYCGITFY KDHLILCSNI
     GEYAEAVLEI ENQPMSTEEL QAIVDPNTSA KGFRQKLYKS RSVIRTDVRM WGLRDWGLDE
     YNSIEQTITD MLNAHDGSMQ YDALIDELLD RYSVSKSSLW AKLNEGPFSV RENVVSLGRP
     SDGAKSSVDP YSTAKLFRLD KGWAFRFTVT QRLKGGSGFY ATKAIANILH MKSGDVKHLS
     SPIGLQRIAW TSSVITIGTI RRFIVEGVVN VGQEAFCLFN DDESFSIIPM RAVGKSDIRG
     ALALACLPAT DDVDLARHYL ASAIGLPSNA TFRDLIQKYK ERGDSDISQC LATYSE
//