ID D2QNC3_SPILD Unreviewed; 586 AA.
AC D2QNC3;
DT 02-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 02-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=SbsA Ig-like domain-containing protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=Slin_3301 {ECO:0000313|EMBL:ADB39312.1};
OS Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896 / Claus 1).
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.
OX NCBI_TaxID=504472 {ECO:0000313|EMBL:ADB39312.1, ECO:0000313|Proteomes:UP000002028};
RN [1] {ECO:0000313|Proteomes:UP000002028}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33905 / DSM 74 / LMG 10896
RC {ECO:0000313|Proteomes:UP000002028};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K.,
RA Mikhailova N., Ovchinnikova G., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindal B., Schutze A., Schneider S.,
RA Goker M., Klenk H.-P., Eisen J.A.;
RT "The complete chromosome of Spirosoma linguale DSM 74.";
RL Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADB39312.1, ECO:0000313|Proteomes:UP000002028}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33905 / DSM 74 / LMG 10896
RC {ECO:0000313|Proteomes:UP000002028};
RX PubMed=21304700;
RA Lail K., Sikorski J., Saunders E., Lapidus A., Glavina Del Rio T.,
RA Copeland A., Tice H., Cheng J.-F., Lucas S., Nolan M., Bruce D.,
RA Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Ovchinnikova G.,
RA Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.-J.,
RA Jeffries C.D., Chain P., Brettin T., Detter J.C., Schuetze A., Rohde M.,
RA Tindall B.J., Goeker M., Bristow J., Eisen J.A., Markowitz V.,
RA Hugenholtz P., Kyrpides N.C., Klenk H.-P., Chen F.;
RT "Complete genome sequence of Spirosoma linguale type strain (1).";
RL Stand. Genomic Sci. 2:176-185(2010).
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DR EMBL; CP001769; ADB39312.1; -; Genomic_DNA.
DR AlphaFoldDB; D2QNC3; -.
DR STRING; 504472.Slin_3301; -.
DR KEGG; sli:Slin_3301; -.
DR eggNOG; COG4704; Bacteria.
DR HOGENOM; CLU_014237_1_0_10; -.
DR Proteomes; UP000002028; Chromosome.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR029413; RG-lyase_II.
DR InterPro; IPR032812; SbsA_Ig.
DR Pfam; PF13205; Big_5; 1.
DR Pfam; PF14686; fn3_3; 1.
DR SUPFAM; SSF49452; Starch-binding domain-like; 1.
PE 4: Predicted;
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..25
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 26..586
FT /note="SbsA Ig-like domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003034018"
FT DOMAIN 33..132
FT /note="SbsA Ig-like"
FT /evidence="ECO:0000259|Pfam:PF13205"
FT DOMAIN 173..203
FT /note="Rhamnogalacturonan lyase"
FT /evidence="ECO:0000259|Pfam:PF14686"
SQ SEQUENCE 586 AA; 64860 MW; 1FFE9F40B56DE5D6 CRC64;
MSFRHLVLSC LLVLPILLQN CAQVAQPPGG KKDTLAPKLV SSLPTPRQLN YTGKTVELEF
DEYVNSENLQ QKITITPQDS NTFIVKSLPL GIRLSFNKPF LPNTTYTIDF ADGIKDITER
NIAKNTKVVF STGPVIDSLY LTGNVVDDES REPLLGFVVG LFASTDTLPI NRKRPQYFAR
TDSNGNYRIE NVKAGLYRVY GFDDKDLNLV NNTPGERIAF RDSVLNLNRN YTGIDLVAFR
GYGKPRISRR ERTDETLGLE LSSGIASYKL RYGRPVSTSA VSTSAVSTTA VSTTAVSTTA
VSTTAASTTA STGSYSGDTL ISFLETPKMI RLFRPANRAA DDTLHLTVVA EDSVGNVTEL
RERIYFSPLK TKAKNRSPLT VQVSPPSNEP IDNNLEFTLV FSKPVFSYKT ERIIIGPDST
KPFVLTPANL TWTNNKSRLV IRQKTNLTDT LLFRLQKGAF ISVQGDTLAR YSARYTIAEE
DSYGLIAGHV NPATTGAAGN KFIVELLDDK YTVVRSAYGT PSYSFGRLKP GLYRVRLIID
ANGNRKRDIG NVLKGLQPER MIYNPGTEEN GTIRVKQNFE LTDIDF
//
