GenomeNet

Database: UniProt
Entry: D3D6C1_9ACTN
LinkDB: D3D6C1_9ACTN
Original site: D3D6C1_9ACTN 
ID   D3D6C1_9ACTN            Unreviewed;      1148 AA.
AC   D3D6C1;
DT   23-MAR-2010, integrated into UniProtKB/TrEMBL.
DT   23-MAR-2010, sequence version 1.
DT   24-JAN-2024, entry version 72.
DE   RecName: Full=DNA 3'-5' helicase {ECO:0000256|ARBA:ARBA00034808};
DE            EC=5.6.2.4 {ECO:0000256|ARBA:ARBA00034808};
GN   ORFNames=FrEUN1fDRAFT_5343 {ECO:0000313|EMBL:EFC81514.1};
OS   Parafrankia sp. EUN1f.
OC   Bacteria; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae;
OC   Parafrankia.
OX   NCBI_TaxID=102897 {ECO:0000313|EMBL:EFC81514.1, ECO:0000313|Proteomes:UP000004777};
RN   [1] {ECO:0000313|EMBL:EFC81514.1, ECO:0000313|Proteomes:UP000004777}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EUN1f {ECO:0000313|EMBL:EFC81514.1,
RC   ECO:0000313|Proteomes:UP000004777};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Tice H., Bruce D., Goodwin L.,
RA   Pitluck S., Larimer F., Land M.L., Hauser L., Beauchemin N., Sen A.,
RA   Fernandez M., Tisa L.;
RT   "The draft genome of Frankia sp. EUN1f.";
RL   Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=5.6.2.4;
CC         Evidence={ECO:0000256|ARBA:ARBA00034618};
CC   -!- SIMILARITY: Belongs to the helicase family. UvrD subfamily.
CC       {ECO:0000256|ARBA:ARBA00009922}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFC81514.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ADGX01000103; EFC81514.1; -; Genomic_DNA.
DR   AlphaFoldDB; D3D6C1; -.
DR   Proteomes; UP000004777; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR   GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   CDD; cd17932; DEXQc_UvrD; 1.
DR   Gene3D; 1.10.10.160; -; 1.
DR   Gene3D; 3.90.320.10; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR013986; DExx_box_DNA_helicase_dom_sf.
DR   InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR   InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR011604; PDDEXK-like_dom_sf.
DR   InterPro; IPR038726; PDDEXK_AddAB-type.
DR   InterPro; IPR011335; Restrct_endonuc-II-like.
DR   InterPro; IPR014016; UvrD-like_ATP-bd.
DR   PANTHER; PTHR11070:SF59; DNA HELICASE; 1.
DR   PANTHER; PTHR11070; UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER; 1.
DR   Pfam; PF12705; PDDEXK_1; 1.
DR   Pfam; PF00580; UvrD-helicase; 1.
DR   Pfam; PF13361; UvrD_C; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF52980; Restriction endonuclease-like; 1.
DR   PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
DR   PROSITE; PS51217; UVRD_HELICASE_CTER; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW   ProRule:PRU00560}; DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Helicase {ECO:0000256|PROSITE-ProRule:PRU00560,
KW   ECO:0000313|EMBL:EFC81514.1};
KW   Hydrolase {ECO:0000256|PROSITE-ProRule:PRU00560};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW   ProRule:PRU00560}.
FT   DOMAIN          5..302
FT                   /note="UvrD-like helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51198"
FT   DOMAIN          313..655
FT                   /note="UvrD-like helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51217"
FT   REGION          470..516
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1013..1061
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1024..1038
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         26..33
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00560"
SQ   SEQUENCE   1148 AA;  121272 MW;  9C974224D5FB9B11 CRC64;
     MVSPIVLDAA QAEVVGHAGG PLLVLAGPGT GKTTTLVEAV ARRVEAGADP ASLLVLTFSR
     RAARHLRERL AVRLGAGAVG PAAWTFHAWC LALLRVYGAD TASGGPRLLS GPEQDARLRD
     LLEGSRELGR PAWPDALAGA LGTRGFAEEV RMLMARAREV GVDPPALARI ARRVGRADWK
     AVAEFYGDYL DALGAEGAID YADLVHSAAN LTAQQPVLAS LRQRYQAVFV DEYQDTDPAQ
     ERLLAAVAGG GGDLVVFGDP DQAIYAFRGA QVRGLLDFPA RFPSRDGSPA PVTALRRCRR
     MAPAPLAASR RVAARLPSAG LPVRYVRAHR DLVPADSAAG PGQVSVRTYP TAGAEAEAVA
     DLLRREHLEN GVGWADMAVL VRSTAGLGVL RRVLTASGVP VSVGGGELPV AREPAAELLL
     TALRCADDPS RHLTPETARA LLTSPLGGAD PAGLRALGRE LRALDAATTV SPAQDDALAR
     DAAADDAPAQ EDVPSPDGGD EHAGAARMPG TPASSSELLR AAVADPQRML LMVPDELAAP
     VHRLGQLLRT VRAELRRGGA PEDALWTLWS ASGWGPRLER ASAAGGAAGR SADRDLDAVV
     ALFDAVERLG ERRGPGFGVA SVVSELTHQQ IAPDTETRAG RPATVRLLTA HRSKGLEWQV
     VVVCGVQDGV WPDLRQRHSL LGAEQLDAPH RGGGGVRPPR TRDELLADER RLFYVALTRA
     RRRLVVTAVD GADDDGEQPS RFLDELGVQV EKVRSRSVRP LTLVGLVAAL RRLTVDPDAS
     AAMRSAAAVR LAALAAARDG AGRTLVPAAH PNRWWGLVDV TSSSVPVVAP DGPIALSGSS
     LSGLATCGLR WFLEHEAQAA EPASAAQGFG KVVHALADEV SSGRTPARMD ALDARLDLVW
     RQLEFDSRWR SEQERSAARE ALRRFLDWHA ARRREVVASE VRFACDIEVA GRVVRLRGFI
     DRVELDDDGR VHVVDFKTGR AAPSRRDLQT HAQLGSYQLA VREGALDRVL DEAAAGSRAA
     PDPGSATDSG SATGLGSGSD PGSVPDPGSA AGSRPPAVPG GAELVHLRRD AGGESLGPRL
     PDEQPAPPEV QAQEALPTDG RVWIDDLVED AVRTITSESF RPTPGDACTM CSFRRSCPAR
     PEGEQVID
//
DBGET integrated database retrieval system