ID D3E4D6_METRM Unreviewed; 480 AA.
AC D3E4D6;
DT 23-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 23-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN Name=recJ2 {ECO:0000313|EMBL:ADC47397.1};
GN OrderedLocusNames=mru_1547 {ECO:0000313|EMBL:ADC47397.1};
OS Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 /
OS OCM 146 / M1) (Methanobacterium ruminantium).
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.
OX NCBI_TaxID=634498 {ECO:0000313|EMBL:ADC47397.1, ECO:0000313|Proteomes:UP000008680};
RN [1] {ECO:0000313|EMBL:ADC47397.1, ECO:0000313|Proteomes:UP000008680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35063 / DSM 1093 / JCM 13430 / OCM 146 / M1
RC {ECO:0000313|Proteomes:UP000008680};
RX PubMed=20126622; DOI=10.1371/journal.pone.0008926;
RA Leahy S.C., Kelly W.J., Altermann E., Ronimus R.S., Yeoman C.J.,
RA Pacheco D.M., Li D., Kong Z., McTavish S., Sang C., Lambie S.C.,
RA Janssen P.H., Dey D., Attwood G.T.;
RT "The genome sequence of the rumen methanogen Methanobrevibacter ruminantium
RT reveals new possibilities for controlling ruminant methane emissions.";
RL PLoS ONE 5:E8926-E8926(2010).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
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DR EMBL; CP001719; ADC47397.1; -; Genomic_DNA.
DR RefSeq; WP_012956346.1; NC_013790.1.
DR AlphaFoldDB; D3E4D6; -.
DR STRING; 634498.mru_1547; -.
DR GeneID; 8771200; -.
DR KEGG; mru:mru_1547; -.
DR PATRIC; fig|634498.28.peg.1549; -.
DR eggNOG; arCOG00427; Archaea.
DR HOGENOM; CLU_042622_0_0_2; -.
DR OrthoDB; 36101at2157; -.
DR Proteomes; UP000008680; Chromosome.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR048515; DHH_CID.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR NCBIfam; NF040701; RecJ_Meth; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF21763; DHH_CID; 1.
DR Pfam; PF02272; DHHA1; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ADC47397.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ADC47397.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000008680}.
FT DOMAIN 26..143
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 196..276
FT /note="DHH-CID"
FT /evidence="ECO:0000259|Pfam:PF21763"
FT DOMAIN 354..470
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
SQ SEQUENCE 480 AA; 53694 MW; 82F5A23E8F2EBF64 CRC64;
MIETLPPDMK QKYEEAKELI ESSEDIKIYS HTDCDGISSG AILSTILKRI GKDYEIEIVN
LDVLEDLEIE HELTIFSDLG SGQPVDKHAK KDSKILILDH HPPLREMDYP DSVEYTYLEI
NPMFHDIDGS QEICGGGLCY LLAKEFGYRD LSWIGVLAAI GDMQNTKTGK LQGMNKTILQ
DAKEEGLVSS DTDLSLYGRQ TRPLFVALSY FSDVKLPITN NKNETIALLQ RLGIPRRIKD
ESVPSGERAT TLSDLNDAQK RALTSELIRM ISNEIPPRYS IYVPKLVIAD TYEFLAEEDG
TFLRDASEFS TAMNACVRNN EEVVALKILE GNRAEALDAL EIISKDHRGY LAENIQSIED
EHKIIQMKNL QYFDGSGIRS NVVGTIAGMV LSYGDWRKPM IAFTQVSDEN QDLKISLRCS
RLLAYDGIHF GNIIREVAQS LGGNGGGHNV ACGAYIPKDK KDEFLNLMNE KLEGKLALED
//
