ID D3E9T2_GEOS4 Unreviewed; 777 AA.
AC D3E9T2;
DT 23-MAR-2010, integrated into UniProtKB/TrEMBL.
DT 23-MAR-2010, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACX64739.1};
GN OrderedLocusNames=GYMC10_2461 {ECO:0000313|EMBL:ACX64739.1};
OS Geobacillus sp. (strain Y412MC10).
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=481743 {ECO:0000313|EMBL:ACX64739.1, ECO:0000313|Proteomes:UP000002381};
RN [1] {ECO:0000313|Proteomes:UP000002381}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Y412MC10 {ECO:0000313|Proteomes:UP000002381};
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.,
RA Brumm P., Mead D.;
RT "Complete sequence of Geobacillus sp. Y412MC10.";
RL Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACX64739.1, ECO:0000313|Proteomes:UP000002381}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Y412MC10 {ECO:0000313|EMBL:ACX64739.1,
RC ECO:0000313|Proteomes:UP000002381};
RX PubMed=23408395; DOI=10.4056/sigs.2605792;
RA Mead D.A., Lucas S., Copeland A., Lapidus A., Cheng J.F., Bruce D.C.,
RA Goodwin L.A., Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C.S.,
RA Tapia R., Land M., Hauser L.J., Chang Y.J., Kyrpides N.C., Ivanova N.N.,
RA Ovchinnikova G., Woyke T., Brumm C., Hochstein R., Schoenfeld T., Brumm P.;
RT "Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel
RT Paenibacillus lautus strain Isolated from Obsidian Hot Spring in
RT Yellowstone National Park.";
RL Stand. Genomic Sci. 6:381-400(2012).
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DR EMBL; CP001793; ACX64739.1; -; Genomic_DNA.
DR RefSeq; WP_015734748.1; NC_013406.1.
DR AlphaFoldDB; D3E9T2; -.
DR STRING; 481743.GYMC10_2461; -.
DR KEGG; gym:GYMC10_2461; -.
DR HOGENOM; CLU_019175_1_0_9; -.
DR Proteomes; UP000002381; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR_DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..42
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 297..318
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 663..762
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 777 AA; 88142 MW; BE9E047E36590D83 CRC64;
MGKLTTTTAR NERSNRVSVF VTLLMSYLVV LLIPVIVFWG LYTQIERIMI ENANNSNMAL
IEQAKQVVDS RLDEMHLISR NITSHPRLDA LLKAGSPQTG AEHYNYYTFM QEMQRYRNSS
SFITDFYVYL DESDTVLSPT LKTTSSVLFS DIYGYESLTF QQYQADILRG VHFNRYLPVT
EVGKGLNQKR MLTYMQTLPF GEKNNPKGAL VMLIDERQIT GLLEEIVKTN NGTISIKDAS
GQVILRAGET GVSNVGKAED KQAVMTVSSR SARSGWEYVS VVPEKVFMEK VNMVKRMAAG
VLGICLAAGV AACAYMTYRA YYPLRDIIRF IRQSHPVKEG KVRNEYDFIK STMADSFGKQ
TEMKEQLSRQ TPVIRSNFLQ RLLKGNVDAA DMSEHALEFM GISFPFPGFA VALIELRDAS
GFIHNERESE WALIRFVTGK VAEEIHPFTA YSVDLEKNQV AMILNMPEPL QDKAGELYDW
AEQVKLVIEQ RFKSEITIAI SDIRSDLGCL ASGYTQSLKA LEYSIFTAYK PILFYDEMKQ
KTGVYYDFPI ETEIQLINAM KSGDTDKAQD IIQSLYHNNF SGQSISPELG RLMFANLLST
MFKLLNALNL KYEDVFGQAG KSIEDITEGS TVEELYREVK WMFGQVCLYV RDQRGDSSSQ
LLDKIKSYIT EHHDDAMISL ASIAEQFDIT PPYLSAFFKK NSGTNLTDYL AKIRIERSKE
MMRDAKNTIS HIARSVGYTS DVGFIRVFKK YEGITPGKYK ETLHSLSSTL RNDHLNS
//