GenomeNet

Database: UniProt
Entry: D3IKV9_9BACT
LinkDB: D3IKV9_9BACT
Original site: D3IKV9_9BACT 
ID   D3IKV9_9BACT            Unreviewed;       146 AA.
AC   D3IKV9;
DT   23-MAR-2010, integrated into UniProtKB/TrEMBL.
DT   23-MAR-2010, sequence version 1.
DT   27-MAR-2024, entry version 67.
DE   RecName: Full=Large ribosomal subunit protein uL11 {ECO:0000256|HAMAP-Rule:MF_00736};
GN   Name=rplK {ECO:0000256|HAMAP-Rule:MF_00736,
GN   ECO:0000313|EMBL:EFC68077.1};
GN   ORFNames=HMPREF0670_02128 {ECO:0000313|EMBL:EFC68077.1};
OS   Prevotella sp. oral taxon 317 str. F0108.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC   Prevotella.
OX   NCBI_TaxID=575615 {ECO:0000313|EMBL:EFC68077.1, ECO:0000313|Proteomes:UP000003829};
RN   [1] {ECO:0000313|EMBL:EFC68077.1, ECO:0000313|Proteomes:UP000003829}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=F0108 {ECO:0000313|EMBL:EFC68077.1,
RC   ECO:0000313|Proteomes:UP000003829};
RG   The Broad Institute Genome Sequencing Platform;
RA   Ward D., Feldgarden M., Earl A., Young S.K., Zeng Q., Koehrsen M.,
RA   Alvarado L., Berlin A., Bochicchio J., Borenstein D., Chapman S.B.,
RA   Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A.,
RA   Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D., Larson L.,
RA   Lewis B., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T.,
RA   Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., Walk T., White J.,
RA   Yandava C., Izard J., Baranova O.V., Blanton J.M., Tanner A.C.,
RA   Dewhirst F.E., Haas B., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Prevotella sp. Oral Taxon 317 strain F0108.";
RL   Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Forms part of the ribosomal stalk which helps the ribosome
CC       interact with GTP-bound translation factors. {ECO:0000256|HAMAP-
CC       Rule:MF_00736, ECO:0000256|RuleBase:RU003979}.
CC   -!- SUBUNIT: Part of the ribosomal stalk of the 50S ribosomal subunit.
CC       Interacts with L10 and the large rRNA to form the base of the stalk.
CC       L10 forms an elongated spine to which L12 dimers bind in a sequential
CC       fashion forming a multimeric L10(L12)X complex. {ECO:0000256|HAMAP-
CC       Rule:MF_00736}.
CC   -!- PTM: One or more lysine residues are methylated. {ECO:0000256|HAMAP-
CC       Rule:MF_00736, ECO:0000256|RuleBase:RU003979}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uL11 family.
CC       {ECO:0000256|ARBA:ARBA00010537, ECO:0000256|HAMAP-Rule:MF_00736,
CC       ECO:0000256|RuleBase:RU003978}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GG740074; EFC68077.1; -; Genomic_DNA.
DR   RefSeq; WP_009231223.1; NZ_GG740074.1.
DR   AlphaFoldDB; D3IKV9; -.
DR   GeneID; 84902921; -.
DR   eggNOG; COG0080; Bacteria.
DR   HOGENOM; CLU_074237_2_1_10; -.
DR   Proteomes; UP000003829; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0070180; F:large ribosomal subunit rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   CDD; cd00349; Ribosomal_L11; 1.
DR   Gene3D; 1.10.10.250; Ribosomal protein L11, C-terminal domain; 1.
DR   Gene3D; 3.30.1550.10; Ribosomal protein L11/L12, N-terminal domain; 1.
DR   HAMAP; MF_00736; Ribosomal_L11; 1.
DR   InterPro; IPR000911; Ribosomal_uL11.
DR   InterPro; IPR006519; Ribosomal_uL11_bac-typ.
DR   InterPro; IPR020783; Ribosomal_uL11_C.
DR   InterPro; IPR036769; Ribosomal_uL11_C_sf.
DR   InterPro; IPR020785; Ribosomal_uL11_CS.
DR   InterPro; IPR020784; Ribosomal_uL11_N.
DR   InterPro; IPR036796; Ribosomal_uL11_N_sf.
DR   NCBIfam; TIGR01632; L11_bact; 1.
DR   PANTHER; PTHR11661:SF1; 39S RIBOSOMAL PROTEIN L11, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR11661; 60S RIBOSOMAL PROTEIN L12; 1.
DR   Pfam; PF00298; Ribosomal_L11; 1.
DR   Pfam; PF03946; Ribosomal_L11_N; 1.
DR   SMART; SM00649; RL11; 1.
DR   SUPFAM; SSF54747; Ribosomal L11/L12e N-terminal domain; 1.
DR   SUPFAM; SSF46906; Ribosomal protein L11, C-terminal domain; 1.
DR   PROSITE; PS00359; RIBOSOMAL_L11; 1.
PE   3: Inferred from homology;
KW   Methylation {ECO:0000256|HAMAP-Rule:MF_00736,
KW   ECO:0000256|RuleBase:RU003979};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003829};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_00736};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_00736};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW   Rule:MF_00736};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW   Rule:MF_00736}.
FT   DOMAIN          9..66
FT                   /note="Large ribosomal subunit protein uL11 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03946"
FT   DOMAIN          71..139
FT                   /note="Large ribosomal subunit protein uL11 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF00298"
SQ   SEQUENCE   146 AA;  15556 MW;  841EF72D9FF8C46D CRC64;
     MAKEVAGLIK LQIKGGAANP SPPVGPALGS KGINIMGFCK EFNARTQDKA GKVIPVVITY
     YTDKSFSFEL KTPPAAVQLK EVAKVKSGSA QPNRQKVASV TWEQIKVIAE DKMKDLNCFT
     VESAMKLIAG TARSMGITVN GEFPGK
//
DBGET integrated database retrieval system