ID D3SBJ4_THISK Unreviewed; 366 AA.
AC D3SBJ4;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ADC72399.1};
GN OrderedLocusNames=TK90_1908 {ECO:0000313|EMBL:ADC72399.1};
OS Thioalkalivibrio sp. (strain K90mix).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
OC Ectothiorhodospiraceae; Thioalkalivibrio.
OX NCBI_TaxID=396595 {ECO:0000313|EMBL:ADC72399.1, ECO:0000313|Proteomes:UP000009099};
RN [1] {ECO:0000313|Proteomes:UP000009099}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K90mix {ECO:0000313|Proteomes:UP000009099};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Foster B., Sun H., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Sorokin D.Y., Muyzer G., Woyke T.;
RT "Complete sequence of chromosome of Thioalkalivibrio sp. K90mix.";
RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADC72399.1, ECO:0000313|Proteomes:UP000009099}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K90mix {ECO:0000313|EMBL:ADC72399.1,
RC ECO:0000313|Proteomes:UP000009099};
RX PubMed=22675584; DOI=10.4056/sigs.2315092;
RA Muyzer G., Sorokin D.Y., Mavromatis K., Lapidus A., Foster B., Sun H.,
RA Ivanova N., Pati A., D'haeseleer P., Woyke T., Kyrpides N.C.;
RT "Complete genome sequence of Thioalkalivibrio sp. K90mix.";
RL Stand. Genomic Sci. 5:341-355(2011).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001905; ADC72399.1; -; Genomic_DNA.
DR RefSeq; WP_012983274.1; NC_013889.1.
DR AlphaFoldDB; D3SBJ4; -.
DR STRING; 396595.TK90_1908; -.
DR KEGG; tkm:TK90_1908; -.
DR eggNOG; COG1423; Bacteria.
DR HOGENOM; CLU_061502_0_0_6; -.
DR OrthoDB; 245177at2; -.
DR Proteomes; UP000009099; Chromosome.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR CDD; cd07894; Adenylation_RNA_ligase; 1.
DR Gene3D; 3.10.450.740; -; 1.
DR Gene3D; 3.30.1490.70; -; 1.
DR Gene3D; 3.30.70.2160; -; 1.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR InterPro; IPR041596; Lig_Pab1020_C.
DR InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR InterPro; IPR001072; RNA_ligase_Pab1020.
DR NCBIfam; TIGR01209; RNA ligase; 1.
DR Pfam; PF18330; Lig_C; 1.
DR Pfam; PF09414; RNA_ligase; 1.
DR PRINTS; PR01048; Y414FAMILY.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:ADC72399.1}.
FT DOMAIN 72..226
FT /note="RNA ligase"
FT /evidence="ECO:0000259|Pfam:PF09414"
FT DOMAIN 240..361
FT /note="RNA ligase Pab1020 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF18330"
SQ SEQUENCE 366 AA; 41390 MW; 4F091D7DC18F0BDE CRC64;
MIERHVLQEA IDNRRAEALT FDELEYARLL EPVNHYPRGS VVLPDGSVVP GYPSIGRIQS
LEAGLPRQFE QPFWAEEKID GFNVRILRWQ GRVYAFSRGG YVCAFSTDRV VDFMDPVIFN
AEPNLILCAE IAGPDTPYLE GSTPRVAHDV GLFVFDLMRL GQPGFVSQPE KFALIERHAL
PPAPLHGWFT PRDTRALGEL IRRLDEEGAE GLVLKTADGQ HRAKYVTGSS CVSDIRVCAE
QLLDLPPEYF TNRLTRLAIF LSEHPDRHHA DLDQALGQAL LSGLHGAVAQ HRRQGHVGHR
YRCRFREHAS ALRFMNHMRA TGGRHVSFAQ DAPRQEDGYW LLEFERQFDR ITGTLASALA
GDRQYD
//
