GenomeNet

Database: UniProt
Entry: D3SSI7_NATMM
LinkDB: D3SSI7_NATMM
Original site: D3SSI7_NATMM 
ID   D3SSI7_NATMM            Unreviewed;       327 AA.
AC   D3SSI7;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   08-MAY-2019, entry version 42.
DE   SubName: Full=DUF1616 family protein {ECO:0000313|EMBL:ADD06832.1};
GN   OrderedLocusNames=Nmag_3282 {ECO:0000313|EMBL:ADD06832.1};
GN   ORFNames=C500_13826 {ECO:0000313|EMBL:ELY28241.1};
OS   Natrialba magadii (strain ATCC 43099 / DSM 3394 / CIP 104546 / JCM
OS   8861/ NBRC 102185 / NCIMB 2190 / MS3) (Natronobacterium magadii).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria;
OC   Natrialbales; Natrialbaceae; Natrialba.
OX   NCBI_TaxID=547559 {ECO:0000313|EMBL:ADD06832.1, ECO:0000313|Proteomes:UP000001879};
RN   [1] {ECO:0000313|Proteomes:UP000001879}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 /
RC   NCIMB 2190 / MS3 {ECO:0000313|Proteomes:UP000001879};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA   Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E.,
RA   Maupin-Furlow J.A., Woyke T.;
RT   "Complete sequence of chromosome of Natrialba magadii ATCC 43099.";
RL   Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADD06832.1, ECO:0000313|Proteomes:UP000001879}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43099 {ECO:0000313|EMBL:ADD06832.1}, and ATCC 43099 / DSM
RC   3394 / CIP 104546 / JCM 8861/ NBRC 102185 / NCIMB 2190 / MS3
RC   {ECO:0000313|Proteomes:UP000001879};
RX   PubMed=22559199; DOI=10.1186/1471-2164-13-165;
RA   Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F.,
RA   Sastre D.E., Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W.,
RA   Goodwin L.A., Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T.,
RA   Maupin-Furlow J.A.;
RT   "A comparative genomics perspective on the genetic content of the
RT   alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T.";
RL   BMC Genomics 13:165-165(2012).
RN   [3] {ECO:0000313|Proteomes:UP000011543}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 /
RC   NCIMB 2190 / MS3 {ECO:0000313|Proteomes:UP000011543};
RA   Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D.,
RA   Darling A., Eisen J.A., Facciotti M.T.;
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:ELY28241.1, ECO:0000313|Proteomes:UP000011543}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 /
RC   NCIMB 2190 / MS3 {ECO:0000313|Proteomes:UP000011543}, and MS-3
RC   {ECO:0000313|EMBL:ELY28241.1};
RX   PubMed=25393412;
RA   Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I.,
RA   Wu D., Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT   "Phylogenetically driven sequencing of extremely halophilic archaea
RT   reveals strategies for static and dynamic osmo-response.";
RL   PLoS Genet. 10:E1004784-E1004784(2014).
RN   [5] {ECO:0000313|EMBL:ADD06832.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=ATCC 43099 {ECO:0000313|EMBL:ADD06832.1};
RA   Capua I., De Benedictis P., Joannis T., Lombin L.H., Cattoli G.;
RL   Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001932; ADD06832.1; -; Genomic_DNA.
DR   EMBL; AOHS01000043; ELY28241.1; -; Genomic_DNA.
DR   RefSeq; WP_004215949.1; NZ_AOHS01000043.1.
DR   STRING; 547559.Nmag_3282; -.
DR   EnsemblBacteria; ADD06832; ADD06832; Nmag_3282.
DR   EnsemblBacteria; ELY28241; ELY28241; C500_13826.
DR   GeneID; 8826146; -.
DR   KEGG; nmg:Nmag_3282; -.
DR   PATRIC; fig|547559.17.peg.2735; -.
DR   eggNOG; arCOG02884; Archaea.
DR   eggNOG; COG4743; LUCA.
DR   HOGENOM; HOG000237151; -.
DR   OMA; MSDTDWW; -.
DR   OrthoDB; 64460at2157; -.
DR   BioCyc; NMAG547559:G1GHK-3230-MONOMER; -.
DR   Proteomes; UP000001879; Chromosome.
DR   Proteomes; UP000011543; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR011674; DUF1616.
DR   Pfam; PF07760; DUF1616; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001879,
KW   ECO:0000313|Proteomes:UP000011543};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001879};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM      6     28       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     35     55       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     89    107       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    119    139       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    174    194       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       13    324       DUF1616. {ECO:0000259|Pfam:PF07760}.
SQ   SEQUENCE   327 AA;  35120 MW;  2F42145D1697A443 CRC64;
     MSDTDWWFLD LAVVIATTGA LSIGLFTAIS GPVRIALALP LVLFLPGYAL VSALFPDEAD
     ETYQDFDEEK TGLGNPLLLT RGLEPIERGI LSVVFSVAIV PAITLFASAT PRGLTLDPVL
     LGIALTTIIL SLIAIVARYR CPPDQRFAPT QTKLSVFFPR FRPNSYSKTN PRPYNIAIVL
     ALGVLLLSAG FAVANPPQHE GYTEFAVETS EVDGDIETMY DAEYTAGEAT SLSVSITNQE
     HSEQSYTTVA LLERVDDSGE PAGEAEQLAS TSTTIADGDT AEPTLEFTPS MQGDDLQVTL
     LLYQGEAPAE PDAESAYRVI ELPVVVE
//
DBGET integrated database retrieval system