ID D3T1Z3_NATMM Unreviewed; 445 AA.
AC D3T1Z3;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE SubName: Full=IS1341-type transposase ISNma23 {ECO:0000313|EMBL:ADD07602.1};
DE SubName: Full=Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELY27077.1};
GN OrderedLocusNames=Nmag_4077 {ECO:0000313|EMBL:ADD07602.1};
GN ORFNames=C500_14605 {ECO:0000313|EMBL:ELY27077.1};
OS Natrialba magadii (strain ATCC 43099 / DSM 3394 / CCM 3739 / CIP 104546 /
OS IAM 13178 / JCM 8861 / NBRC 102185 / NCIMB 2190 / MS3) (Natronobacterium
OS magadii).
OG Plasmid pNMAG02 {ECO:0000313|EMBL:ADD07602.1,
OG ECO:0000313|Proteomes:UP000001879}.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natrialba.
OX NCBI_TaxID=547559 {ECO:0000313|EMBL:ADD07602.1, ECO:0000313|Proteomes:UP000001879};
RN [1] {ECO:0000313|Proteomes:UP000001879}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43099 / DSM 3394 / CCM 3739 / CIP 104546 / IAM 13178 / JCM
RC 8861 / NBRC 102185 / NCIMB 2190 / MS3
RC {ECO:0000313|Proteomes:UP000001879};
RC PLASMID=pNMAG02 {ECO:0000313|Proteomes:UP000001879};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E.,
RA Maupin-Furlow J.A., Woyke T.;
RT "Complete sequence of plasmid 2 of Natrialba magadii ATCC 43099.";
RL Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADD07602.1, ECO:0000313|Proteomes:UP000001879}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43099 {ECO:0000313|EMBL:ADD07602.1}, and ATCC 43099 / DSM
RC 3394 / CCM 3739 / CIP 104546 / IAM 13178 / JCM 8861 / NBRC 102185 /
RC NCIMB 2190 / MS3 {ECO:0000313|Proteomes:UP000001879};
RX PubMed=22559199; DOI=10.1186/1471-2164-13-165;
RA Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F., Sastre D.E.,
RA Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W., Goodwin L.A.,
RA Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T., Maupin-Furlow J.A.;
RT "A comparative genomics perspective on the genetic content of the
RT alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T.";
RL BMC Genomics 13:165-165(2012).
RN [3] {ECO:0000313|EMBL:ELY27077.1, ECO:0000313|Proteomes:UP000011543}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43099 / DSM 3394 / CCM 3739 / CIP 104546 / IAM 13178 / JCM
RC 8861 / NBRC 102185 / NCIMB 2190 / MS3
RC {ECO:0000313|Proteomes:UP000011543}, and MS-3
RC {ECO:0000313|EMBL:ELY27077.1};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
RN [4] {ECO:0000313|EMBL:ADD07602.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ATCC 43099 {ECO:0000313|EMBL:ADD07602.1};
RC PLASMID=pNMAG02 {ECO:0000313|EMBL:ADD07602.1};
RA Pfeiffer F.;
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001934; ADD07602.1; -; Genomic_DNA.
DR EMBL; AOHS01000050; ELY27077.1; -; Genomic_DNA.
DR RefSeq; WP_004216130.1; NZ_AOHS01000050.1.
DR AlphaFoldDB; D3T1Z3; -.
DR PaxDb; 547559-Nmag_4077; -.
DR GeneID; 8828811; -.
DR KEGG; nmg:Nmag_4077; -.
DR PATRIC; fig|547559.17.peg.2887; -.
DR eggNOG; arCOG00683; Archaea.
DR HOGENOM; CLU_040997_0_0_2; -.
DR OrthoDB; 295419at2157; -.
DR Proteomes; UP000001879; Plasmid pNMAG02.
DR Proteomes; UP000011543; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Plasmid {ECO:0000313|EMBL:ADD07602.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001879};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 187..300
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 320..387
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 445 AA; 51303 MW; EE41AA3CFED07962 CRC64;
MKRANRFNVR PRSAKEREVF VRWLDASASL WNETNYTRRQ NFLEDDESIW DADTGSLEGK
YKGVLSSSVA QQIIRKNSEA WRSFLSLNEK YHAGKLNEKP SPPGYWGSKD DGRVLRTYVR
NDQYTIEYGE RSRLEVPIGS ELKDELGLNR NQRLRVEVAG EPKWSGEQNR LEIVYDETAD
TFRAFQPVTV PDSRLDSPLA SHEAALDVGV NNLVACTTTT GFQFLFEGRN LFEQFRKTTE
RIAHYQSLLE NQRESSKRID RLYRKRTNRR NHAQDTLVRE LTERLYDEGV STLYVGDIKG
VLSTHWSPCV NEKTHNFWAY RRFINRLEDV CEEYGITVNE VSEAWTTQMC PECGEHKGTI
RHEDSLACPC GFEGHADLVA SESFLRRQNT EVGSMARPVY LKWNNHNWRE HHNPPSLVET
TANEAYTDQS TTVGGNVAVG ESQDD
//
