ID D3VF03_XENNA Unreviewed; 783 AA.
AC D3VF03;
DT 20-APR-2010, integrated into UniProtKB/TrEMBL.
DT 20-APR-2010, sequence version 1.
DT 27-MAR-2024, entry version 69.
DE SubName: Full=Protein yhgF {ECO:0000313|EMBL:CBJ92460.1};
GN OrderedLocusNames=XNC1_4438 {ECO:0000313|EMBL:CBJ92460.1};
OS Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG
OS 1036 / NCIMB 9965 / AN6).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Xenorhabdus.
OX NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ92460.1, ECO:0000313|Proteomes:UP000008075};
RN [1] {ECO:0000313|EMBL:CBJ92460.1, ECO:0000313|Proteomes:UP000008075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 /
RC AN6 {ECO:0000313|Proteomes:UP000008075};
RX PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L.,
RA Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.,
RA Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P.,
RA Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R.,
RA Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S.,
RA Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R.,
RA Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C.,
RA van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B.,
RA Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S.,
RA Goodrich-Blair H.;
RT "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus:
RT convergent lifestyles from divergent genomes.";
RL PLoS ONE 6:E27909-E27909(2011).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FN667742; CBJ92460.1; -; Genomic_DNA.
DR RefSeq; WP_013185663.1; NC_014228.1.
DR AlphaFoldDB; D3VF03; -.
DR STRING; 406817.XNC1_4438; -.
DR KEGG; xne:XNC1_4438; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_6; -.
DR Proteomes; UP000008075; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008075}.
FT DOMAIN 650..719
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 719..783
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 735..768
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 783 AA; 85925 MW; E50DE57008595E89 CRC64;
MNESLSRIIA GELQAQPQQV QAAITLLDEG NTVPFIARYR KEVTGGLDDT QLRQLEIRLG
YLRELSSRRQ TILKSIEEQG KLTVELAEAI NATQSKTELE DLYLPYKPKR RTRGQTAIEA
GLEPLADLLW QDPQQDPELA AAAYVDAEKG VADTKAALDG ARYILMERFA EDAALLAKVR
EYLWKNAHLV SKVVEGKEEE GAKFSDYFDH HETIATVPSH RALAMFRGRN EGVLQLSLNA
DPQCEEAPKE SYCEHIITDH LNLRLNNAPA DSWRKAVVSW TWRIKVLLHL ETELMSTLRE
KAEDEAINVF ARNLHDLMMA APAGMRATMG LDPGLRTGVK VAVVDATGKL IATDTIYPHT
GQENKAAASV AALCTRHQVE LVAIGNGTAS RETERFFANV QKQYPDVIAQ KVVVSEAGAS
VYSASELAAL EFPDLDVSLR GAVSIARRLQ DPLAELVKIE PKSIGVGQYQ HDVSQTQLAK
KLDTVVEDCV NGVGVDLNTA SVALLTRVAG LTRVVAQNIV NWRDENGRFD NREQLLKVSR
LGPKSFLQCA GFLRINQGDN PLDASTVHPE TYPVVEKILA TTAQTLPELM GNPATLRNLS
AQDFTTEKFG IPTVTDILKE LEKPGRDPRP EFKTATFTDG VETMNDLQTG MTLEGTVTNV
TNFGAFVDIG VHQDGLVHIS SLSDRFVEDP HTVVKTGDIV KVKVMDVDLN RKRIALTMRL
DEQPGEAPAR RGGAQSGNRQ EQRNGNGRNG NGRNRHTSRS SGSAPLANSA MSDALAAAFG
KKR
//
