GenomeNet

Database: UniProt
Entry: D3VFA4_XENNA
LinkDB: D3VFA4_XENNA
Original site: D3VFA4_XENNA 
ID   D3VFA4_XENNA            Unreviewed;      1201 AA.
AC   D3VFA4;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   20-APR-2010, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   RecName: Full=Type VI secretion system membrane subunit TssM {ECO:0008006|Google:ProtNLM};
GN   OrderedLocusNames=XNC1_4539 {ECO:0000313|EMBL:CBJ92561.1};
OS   Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG
OS   1036 / NCIMB 9965 / AN6).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Xenorhabdus.
OX   NCBI_TaxID=406817 {ECO:0000313|EMBL:CBJ92561.1, ECO:0000313|Proteomes:UP000008075};
RN   [1] {ECO:0000313|EMBL:CBJ92561.1, ECO:0000313|Proteomes:UP000008075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 /
RC   AN6 {ECO:0000313|Proteomes:UP000008075};
RX   PubMed=22125637; DOI=10.1371/journal.pone.0027909;
RA   Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E.,
RA   Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L.,
RA   Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.,
RA   Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P.,
RA   Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R.,
RA   Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S.,
RA   Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R.,
RA   Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C.,
RA   van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B.,
RA   Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S.,
RA   Goodrich-Blair H.;
RT   "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus:
RT   convergent lifestyles from divergent genomes.";
RL   PLoS ONE 6:E27909-E27909(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FN667742; CBJ92561.1; -; Genomic_DNA.
DR   AlphaFoldDB; D3VFA4; -.
DR   STRING; 406817.XNC1_4539; -.
DR   KEGG; xne:XNC1_4539; -.
DR   eggNOG; COG3523; Bacteria.
DR   HOGENOM; CLU_003353_1_0_6; -.
DR   Proteomes; UP000008075; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR009612; IcmF-rel.
DR   InterPro; IPR010623; IcmF_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR017731; TssM1-like.
DR   InterPro; IPR048677; TssM1_hel.
DR   InterPro; IPR025743; TssM1_N.
DR   NCBIfam; TIGR03348; VI_IcmF; 1.
DR   PANTHER; PTHR36153:SF5; EXPORTED PROTEIN-RELATED; 1.
DR   PANTHER; PTHR36153; INNER MEMBRANE PROTEIN-RELATED; 1.
DR   Pfam; PF06761; IcmF-related; 1.
DR   Pfam; PF14331; IcmF-related_N; 1.
DR   Pfam; PF06744; IcmF_C; 1.
DR   Pfam; PF21070; IcmF_helical; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008075};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        30..49
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        69..88
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        463..484
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          214..467
FT                   /note="Type VI secretion system component TssM1 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF14331"
FT   DOMAIN          519..845
FT                   /note="IcmF-related"
FT                   /evidence="ECO:0000259|Pfam:PF06761"
FT   DOMAIN          971..1032
FT                   /note="Type VI secretion system component TssM1 helical"
FT                   /evidence="ECO:0000259|Pfam:PF21070"
FT   DOMAIN          1074..1180
FT                   /note="Type VI secretion system IcmF C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF06744"
SQ   SEQUENCE   1201 AA;  138746 MW;  36C05F500CC50078 CRC64;
     MKWPSLSSLA PLKSALPALG KFKSLPRFKA TMAVVLALIP CLLLIAVWWW GQEWKIRNDY
     PLESLAARWL ATAIIIMVVL VWIGMKAWHR LRTLEKLNLD VELKVVDPVR VDIEHQDRYL
     EHWKSQLQRH LDSYNYLYER PWYMVVGSQK SGKTSLIKEG YKLSEIAAPE YLRQDDNIPL
     MLHCWLGEKA VIIDPKGQLI DQPVPLNSDK PQINSRLWEA MLNWLAENRQ RQPLNGIILT
     VDTLRLLTDN REQRERYVRE LHQRLQDIRL TFHSQLPLYL VMTKIDLLHG FEAMYQSLDR
     KLRDQILGVT FSLNNRDEKA WRSELEQFWQ QWMNNLNNAM PDMMLNNVDA NQRSALFSFT
     RQIQGLYSYV VQMLEDILYN DEHHRPTLRG VYLTSAHQVG QMDDLFTQSA SAQYHLGSQA
     FPTWPAGDTL PYFTHSLFED VLLAEPNLAA ENRIWLSRNR RQLYTFSTLS ALVIMAMWGG
     WHYFYQKNYR AGEEVLAQAK NFLSVPPPKG DDRYGDLQLS QLNPIRDATL AYGNYHENAS
     FLTDMALYQG GSVGPYVATT YRKLLEQRFL PALMLGLLDD LNQAPASSEE KLEILRVMRM
     MEDKSQRNSA LVAQYMRERW SKAFHGQRNI QDALLTHLDY ALDRTDWKEL RDKGDKEAIT
     NFAPFVKPIR QAQDELKALS VKQRVYQNLR IRAQDVLSAP LNLRDQIGPS FDDVFVASNE
     KRLVIPQLLT RHGLMDYFVR QKDELTKLTE MDSWVLNIAK NNQDKASEAG LQNNDQYSTK
     DQERILNDIN DLYLSEYTAT WRAAMNNLEV RDFDDLPHAI SAIEQVISGE QPIKRALQIL
     SDNTNPPLAD NALSEKQKED WLKQHDYRLL NRISHDFAQE TEVLVERGDK GSTLQSVYQK
     LTALHRYLLA IQNSPVPGKA ALQAVQMRLD KNNSDAIFEV QQMAKTLPEP LNRWVGELAE
     QAWRVVMMEA IRSLEVEWND SVVKQYKTYL AGRYPFNPNA TEEVPLSEFE RFFRPDGTLD
     TFYQQSLKPF VEYNLTTGTD GKALIRPDVM KQLELANRIR TTFFTPQNGL GAQFAIEPLS
     LTGNKRRALL NLDGQLVDYS HGRSNVARLI WPNSMRAGTE SKLTLMPDRS NLAPRSLSFM
     GPWAQLRLIN SGKLTNVQPG FFDVRFSVDG GDMTYRVYVD ESDNPFAGGL FSQFKLPDTL
     Y
//
DBGET integrated database retrieval system