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Database: UniProt
Entry: D3YUD8_MOUSE
LinkDB: D3YUD8_MOUSE
Original site: D3YUD8_MOUSE 
ID   D3YUD8_MOUSE            Unreviewed;       309 AA.
AC   D3YUD8;
DT   20-APR-2010, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 3.
DT   16-OCT-2019, entry version 49.
DE   SubName: Full=Predicted pseudogene 9774 {ECO:0000313|Ensembl:ENSMUSP00000045065};
GN   Name=Gm9774 {ECO:0000313|Ensembl:ENSMUSP00000045065,
GN   ECO:0000313|MGI:MGI:3642386};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC   Muroidea; Muridae; Murinae; Mus; Mus.
OX   NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000045065, ECO:0000313|Proteomes:UP000000589};
RN   [1] {ECO:0000313|Ensembl:ENSMUSP00000045065, ECO:0000313|Proteomes:UP000000589}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000045065,
RC   ECO:0000313|Proteomes:UP000000589};
RX   PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA   Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
RA   She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
RA   Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
RA   Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
RA   Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
RA   Lindblad-Toh K., Eichler E.E., Ponting C.P.;
RT   "Lineage-specific biology revealed by a finished genome assembly of
RT   the mouse.";
RL   PLoS Biol. 7:E1000112-E1000112(2009).
RN   [2] {ECO:0000313|Ensembl:ENSMUSP00000045065}
RP   IDENTIFICATION.
RC   STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000045065};
RG   Ensembl;
RL   Submitted (MAY-2011) to UniProtKB.
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DR   EMBL; AC127036; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   SMR; D3YUD8; -.
DR   STRING; 10090.ENSMUSP00000045065; -.
DR   jPOST; D3YUD8; -.
DR   MaxQB; D3YUD8; -.
DR   PaxDb; D3YUD8; -.
DR   PeptideAtlas; D3YUD8; -.
DR   PRIDE; D3YUD8; -.
DR   Ensembl; ENSMUST00000047300; ENSMUSP00000045065; ENSMUSG00000042165.
DR   MGI; MGI:3642386; Gm9774.
DR   eggNOG; KOG3037; Eukaryota.
DR   eggNOG; ENOG410XSJJ; LUCA.
DR   GeneTree; ENSGT00390000013839; -.
DR   HOGENOM; HOG000005947; -.
DR   InParanoid; D3YUD8; -.
DR   OMA; WINRENQ; -.
DR   TreeFam; TF313410; -.
DR   ChiTaRS; Gm9774; mouse.
DR   Proteomes; UP000000589; Chromosome 3.
DR   Bgee; ENSMUSG00000042165; Expressed in 21 organ(s), highest expression level in liver.
DR   ExpressionAtlas; D3YUD8; baseline and differential.
DR   GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IBA:GO_Central.
DR   GO; GO:0061133; F:endopeptidase activator activity; IBA:GO_Central.
DR   GO; GO:0070628; F:proteasome binding; IBA:GO_Central.
DR   GO; GO:0043130; F:ubiquitin binding; IBA:GO_Central.
DR   GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   Gene3D; 2.30.29.70; -; 1.
DR   Gene3D; 3.40.190.140; -; 1.
DR   InterPro; IPR006773; Rpn13/ADRM1.
DR   InterPro; IPR038633; Rpn13/ADRM1_sf.
DR   InterPro; IPR032368; RPN13_C.
DR   InterPro; IPR038108; RPN13_C_sf.
DR   PANTHER; PTHR12225; PTHR12225; 2.
DR   Pfam; PF04683; Proteasom_Rpn13; 1.
DR   Pfam; PF16550; RPN13_C; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000589};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000589}.
FT   DOMAIN      170    283       RPN13_C. {ECO:0000259|Pfam:PF16550}.
FT   REGION      137    161       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      283    309       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS    142    161       Polar. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS    288    309       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
SQ   SEQUENCE   309 AA;  32939 MW;  C92F51289E52AC9B CRC64;
     MTTSGALFPS LVPGSRGSST KYLVEFRAGK MSLKGTTVTP DKRKGLVYIQ QTDDSLIHFC
     WKDRTSGTVE DDLIIFPDDC EFKRVPQCPS GRVYVLKFKA GSKRLFFWMQ VDLGPSLGQA
     WPACWGAVDL QPAALHPAAS ATSPSPAPSS GNGTSTAASP TQPIQLSDLQ SILATMNVPA
     WPGGSQQVDL ASVLTPEIMA PILANADVQE RLLPYLPSGE SLPQTADESQ NTLTSPQFQQ
     ALGMFSAALA SGQLGPLMSQ FGLPAEAVEA ANKGDVEAFA KAMQNNAKSD PKEGDTKDKK
     DEEEDMSLD
//
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