ID D4GHS9_PANAM Unreviewed; 212 AA.
AC D4GHS9;
DT 18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT 18-MAY-2010, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=YcdC {ECO:0000313|EMBL:ADD77596.1};
GN Name=ycdC {ECO:0000313|EMBL:ADD77596.1};
GN OrderedLocusNames=PANA_2429 {ECO:0000313|EMBL:ADD77596.1};
OS Pantoea ananatis (strain LMG 20103).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Pantoea.
OX NCBI_TaxID=706191 {ECO:0000313|EMBL:ADD77596.1, ECO:0000313|Proteomes:UP000001702};
RN [1] {ECO:0000313|EMBL:ADD77596.1, ECO:0000313|Proteomes:UP000001702}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 20103 {ECO:0000313|EMBL:ADD77596.1,
RC ECO:0000313|Proteomes:UP000001702};
RX PubMed=20348253; DOI=10.1128/JB.00060-10;
RA De Maayer P., Chan W.Y., Venter S.N., Toth I.K., Birch P.R., Joubert F.,
RA Coutinho T.A.;
RT "Genome sequence of Pantoea ananatis LMG20103, the causative agent of
RT Eucalyptus blight and dieback.";
RL J. Bacteriol. 192:2936-2937(2010).
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DR EMBL; CP001875; ADD77596.1; -; Genomic_DNA.
DR RefSeq; WP_013026308.1; NC_013956.2.
DR AlphaFoldDB; D4GHS9; -.
DR STRING; 706191.PANA_2429; -.
DR GeneID; 57267672; -.
DR KEGG; pam:PANA_2429; -.
DR eggNOG; COG1309; Bacteria.
DR HOGENOM; CLU_069356_1_2_6; -.
DR Proteomes; UP000001702; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR InterPro; IPR041474; NicS_C.
DR InterPro; IPR036271; Tet_transcr_reg_TetR-rel_C_sf.
DR PANTHER; PTHR30328:SF54; HTH-TYPE TRANSCRIPTIONAL REPRESSOR SCO4008; 1.
DR PANTHER; PTHR30328; TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF17938; TetR_C_29; 1.
DR Pfam; PF00440; TetR_N; 1.
DR PRINTS; PR00455; HTHTETR.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF48498; Tetracyclin repressor-like, C-terminal domain; 1.
DR PROSITE; PS50977; HTH_TETR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00335}; Reference proteome {ECO:0000313|Proteomes:UP000001702};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..72
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 35..54
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ SEQUENCE 212 AA; 24337 MW; B25B38E8B948364B CRC64;
MTDTTKRKND PEGLKKRILA GALKIFAEFG MQGARLEQIA ESAQTTKRMV VYHFGNKEQL
YIDVLEQVYQ QIREHETGLN LAAMEPGQAI TKLVEASFDY HVSHPDFIRL ICMENLSRGR
YISQSVRLSQ LNRSALDLLD DILTRGQQQG LFIQPLDTLD VHRLISSICV HQVSNRFTFN
TLFSPDKSEE DIISRNRQLA VTATLRYICR HQ
//
