ID D4M9D5_9BACT Unreviewed; 503 AA.
AC D4M9D5;
DT 18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT 18-MAY-2010, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:CBL28480.1};
DE EC=3.1.26.- {ECO:0000313|EMBL:CBL28480.1};
GN ORFNames=SY1_14170 {ECO:0000313|EMBL:CBL28480.1};
OS Fretibacterium fastidiosum.
OC Bacteria; Synergistota; Synergistia; Synergistales; Aminobacteriaceae;
OC Fretibacterium.
OX NCBI_TaxID=651822 {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957};
RN [1] {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SGP1 {ECO:0000313|EMBL:CBL28480.1,
RC ECO:0000313|Proteomes:UP000008957};
RG metaHIT consortium -- http://www.metahit.eu/;
RA Pajon A., Turner K., Parkhill J., Wade W., Vartoukian S.;
RT "The genome sequence of Synergistetes sp. SGP1.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SGP1 {ECO:0000313|EMBL:CBL28480.1,
RC ECO:0000313|Proteomes:UP000008957};
RA Pajon A.;
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR EMBL; FP929056; CBL28480.1; -; Genomic_DNA.
DR AlphaFoldDB; D4M9D5; -.
DR KEGG; sbr:SY1_14170; -.
DR PATRIC; fig|651822.3.peg.648; -.
DR HOGENOM; CLU_003468_5_3_0; -.
DR BioCyc; FFAS651822:G13GF-891-MONOMER; -.
DR Proteomes; UP000008957; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:CBL28480.1};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008957};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 44..110
FT /note="S1 motif"
FT /evidence="ECO:0000259|SMART:SM00316"
SQ SEQUENCE 503 AA; 57285 MW; 4D344E2153C5AF07 CRC64;
MSSLDCVERK IIADTREDEE TRVAILEGGR LADVFIERMW DRQKAGEIYK ARVESVLPGI
NAAFVTIGEG RNAFLYLNDV HGMKVVENQE IVVQVTKTAI KNKGARVTPR ISLPGRYLVL
VPDGGEAGVS RRIVDEEERR RLRHFARELK GDDFGVIIRT AAEGVDEETL AADVESLLAL
WREIEHDAEL QAAPCLLYKD RGLLGRVLRD EVHGSVDEII LDSAEEMRHV NEYVATLYKT
DRPQVSLYEG AVPIFEYYGV EAEIEQALER KVWLRSGAYL VIEHTEALTV IDVNTGKYVG
DLDMRHTTLA TNLEAADEVA RQLRLRSIGG IVVVDFIDME FEEDRKKLLD RLEEVFQLDR
SRARVFSMTQ LGLVELTRKR GRPDLRSVMT RGCPFCNDNG WVLREDTLAL SIKRFLRKIA
QTNRAEALLL QANSMVAQYV RDTYLAMWER ELDVKILVAG MPDFAWSKYR IELQGTLSAV
EHRAHQLERR EESSIVVHRV PAP
//