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Database: UniProt
Entry: D4M9D5_9BACT
LinkDB: D4M9D5_9BACT
Original site: D4M9D5_9BACT 
ID   D4M9D5_9BACT            Unreviewed;       503 AA.
AC   D4M9D5;
DT   18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT   18-MAY-2010, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:CBL28480.1};
DE            EC=3.1.26.- {ECO:0000313|EMBL:CBL28480.1};
GN   ORFNames=SY1_14170 {ECO:0000313|EMBL:CBL28480.1};
OS   Fretibacterium fastidiosum.
OC   Bacteria; Synergistota; Synergistia; Synergistales; Aminobacteriaceae;
OC   Fretibacterium.
OX   NCBI_TaxID=651822 {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957};
RN   [1] {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SGP1 {ECO:0000313|EMBL:CBL28480.1,
RC   ECO:0000313|Proteomes:UP000008957};
RG   metaHIT consortium -- http://www.metahit.eu/;
RA   Pajon A., Turner K., Parkhill J., Wade W., Vartoukian S.;
RT   "The genome sequence of Synergistetes sp. SGP1.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBL28480.1, ECO:0000313|Proteomes:UP000008957}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SGP1 {ECO:0000313|EMBL:CBL28480.1,
RC   ECO:0000313|Proteomes:UP000008957};
RA   Pajon A.;
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR   EMBL; FP929056; CBL28480.1; -; Genomic_DNA.
DR   AlphaFoldDB; D4M9D5; -.
DR   KEGG; sbr:SY1_14170; -.
DR   PATRIC; fig|651822.3.peg.648; -.
DR   HOGENOM; CLU_003468_5_3_0; -.
DR   BioCyc; FFAS651822:G13GF-891-MONOMER; -.
DR   Proteomes; UP000008957; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd04453; S1_RNase_E; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR   InterPro; IPR004659; RNase_E/G.
DR   InterPro; IPR003029; S1_domain.
DR   NCBIfam; TIGR00757; RNaseEG; 1.
DR   PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR   PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR   Pfam; PF10150; RNase_E_G; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE   4: Predicted;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:CBL28480.1};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008957};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT   DOMAIN          44..110
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|SMART:SM00316"
SQ   SEQUENCE   503 AA;  57285 MW;  4D344E2153C5AF07 CRC64;
     MSSLDCVERK IIADTREDEE TRVAILEGGR LADVFIERMW DRQKAGEIYK ARVESVLPGI
     NAAFVTIGEG RNAFLYLNDV HGMKVVENQE IVVQVTKTAI KNKGARVTPR ISLPGRYLVL
     VPDGGEAGVS RRIVDEEERR RLRHFARELK GDDFGVIIRT AAEGVDEETL AADVESLLAL
     WREIEHDAEL QAAPCLLYKD RGLLGRVLRD EVHGSVDEII LDSAEEMRHV NEYVATLYKT
     DRPQVSLYEG AVPIFEYYGV EAEIEQALER KVWLRSGAYL VIEHTEALTV IDVNTGKYVG
     DLDMRHTTLA TNLEAADEVA RQLRLRSIGG IVVVDFIDME FEEDRKKLLD RLEEVFQLDR
     SRARVFSMTQ LGLVELTRKR GRPDLRSVMT RGCPFCNDNG WVLREDTLAL SIKRFLRKIA
     QTNRAEALLL QANSMVAQYV RDTYLAMWER ELDVKILVAG MPDFAWSKYR IELQGTLSAV
     EHRAHQLERR EESSIVVHRV PAP
//
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