ID D4MS82_9FIRM Unreviewed; 569 AA.
AC D4MS82;
DT 18-MAY-2010, integrated into UniProtKB/TrEMBL.
DT 18-MAY-2010, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=CL3_24390 {ECO:0000313|EMBL:CBL36618.1};
OS butyrate-producing bacterium SM4/1.
OC Bacteria; Bacillota; Clostridia; Eubacteriales.
OX NCBI_TaxID=245012 {ECO:0000313|EMBL:CBL36618.1, ECO:0000313|Proteomes:UP000008959};
RN [1] {ECO:0000313|EMBL:CBL36618.1, ECO:0000313|Proteomes:UP000008959}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM4/1 {ECO:0000313|EMBL:CBL36618.1,
RC ECO:0000313|Proteomes:UP000008959};
RG metaHIT consortium -- http://www.metahit.eu/;
RA Pajon A., Turner K., Parkhill J., Duncan S., Flint H.;
RT "The genome sequence of Clostridiales sp. SM4/1.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBL36618.1, ECO:0000313|Proteomes:UP000008959}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM4/1 {ECO:0000313|EMBL:CBL36618.1,
RC ECO:0000313|Proteomes:UP000008959};
RA Pajon A.;
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
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DR EMBL; FP929060; CBL36618.1; -; Genomic_DNA.
DR AlphaFoldDB; D4MS82; -.
DR KEGG; bprm:CL3_24390; -.
DR PATRIC; fig|245012.3.peg.1846; -.
DR HOGENOM; CLU_009736_5_2_9; -.
DR BioCyc; BBAC245012:G1313-1182-MONOMER; -.
DR Proteomes; UP000008959; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 2.40.50.460; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:CBL36618.1};
KW Hydrolase {ECO:0000313|EMBL:CBL36618.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000008959}.
FT DOMAIN 79..226
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 323..442
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 457..564
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT COILED 301..335
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 569 AA; 64277 MW; 873C894A431236EA CRC64;
MAEEIWMLQT KRADFGVIAE RFGIDPVTAR VIRNRGIEGM ENIERYLYGN LDGLYSPWLL
KDMKPAVEIL RQKITAGKRI RIVGDYDIDG VCSTYILYTA LRRLGAEADY AIPDRIKDGY
GINESIIREA HEDGIDTILT CDNGISAFSQ ISLAKEFGMT VIVTDHHEVP LDAEAEVIPP
ADAVVNPKQR DCRYPFPEIC GAVVAYKLVE ALYEEYGIAR EEWLDMLEFA AIATVGDVMR
LQDENRIIVK YGLRRMAETK NLGLKKLAEK NNLDLSTITA YHIGFVIGPC LNAGGRLQTA
KLALSMLLAE TEDEAEALAQ ELKSLNDMRK DMTEQWTAEA KLLADTRYRD DKVLVVFLPE
CHESLAGIIA GRLREYCQKP ALVLTRGEEA VKGSGRSIEA YHMFKKLSEV KELLLKFGGH
PMAAGLSLLE ENIEPFRKAL NENSGLTEED FKAKVWIDVP MPIDYIKERL VEELKILEPF
GQGNEKPLFA QKGVRIRSCR VIGKNKNVVK MVLEGQGGRA MDGMLFTDGL AFEEERNGRR
MLDIVYYPEI NEYNGSRNIQ VVIRRYRFC
//
