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Database: UniProt
Entry: D4X6Y3_9BURK
LinkDB: D4X6Y3_9BURK
Original site: D4X6Y3_9BURK 
ID   D4X6Y3_9BURK            Unreviewed;       870 AA.
AC   D4X6Y3;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   24-JAN-2024, entry version 67.
DE   SubName: Full=Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFF77500.1};
GN   Name=pdeA {ECO:0000313|EMBL:EFF77500.1};
GN   ORFNames=HMPREF0004_1230 {ECO:0000313|EMBL:EFF77500.1};
OS   Achromobacter piechaudii ATCC 43553.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Achromobacter.
OX   NCBI_TaxID=742159 {ECO:0000313|EMBL:EFF77500.1, ECO:0000313|Proteomes:UP000004510};
RN   [1] {ECO:0000313|Proteomes:UP000004510}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43553 {ECO:0000313|Proteomes:UP000004510};
RA   Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L.,
RA   Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V.,
RA   Kovar C., Mata R., Mathew T., Ngo R., Nguyen L., Nguyen N., Okwuonu G.,
RA   Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A.,
RA   Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C.,
RA   Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S.,
RA   Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S.,
RA   Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L.,
RA   Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P.,
RA   Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K.,
RA   Petrosino J., Highlander S., Gibbs R., Gibbs R.;
RT   "Complete sequence of Mobiluncus curtisii ATCC 43063.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EFF77500.1}.
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DR   EMBL; ADMS01000026; EFF77500.1; -; Genomic_DNA.
DR   AlphaFoldDB; D4X6Y3; -.
DR   PATRIC; fig|742159.3.peg.2102; -.
DR   eggNOG; COG3829; Bacteria.
DR   eggNOG; COG5001; Bacteria.
DR   HOGENOM; CLU_000445_70_20_4; -.
DR   OrthoDB; 9813903at2; -.
DR   Proteomes; UP000004510; Unassembled WGS sequence.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 2.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.20.20.450; EAL domain; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 2.
DR   InterPro; IPR012226; Diguanyl_cyclase/Pdiesterase.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR003018; GAF.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013655; PAS_fold_3.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   NCBIfam; TIGR00229; sensory_box; 2.
DR   PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR   PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF13185; GAF_2; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF08447; PAS_3; 1.
DR   Pfam; PF13426; PAS_9; 1.
DR   PIRSF; PIRSF005925; Dos; 2.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00065; GAF; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00086; PAC; 2.
DR   SMART; SM00091; PAS; 2.
DR   SUPFAM; SSF141868; EAL domain-like; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 2.
PE   4: Predicted;
FT   DOMAIN          46..75
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          153..207
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          230..282
FT                   /note="PAC"
FT                   /evidence="ECO:0000259|PROSITE:PS50113"
FT   DOMAIN          476..608
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
FT   DOMAIN          617..870
FT                   /note="EAL"
FT                   /evidence="ECO:0000259|PROSITE:PS50883"
SQ   SEQUENCE   870 AA;  95793 MW;  7710D8A65B2EC5C3 CRC64;
     MKPELLFSGM EPLMLDTQAS VSSAGPQGAA WHADNYLASM DRALLLFDFD ADGALLKVNA
     NFLAAVGYTR EEALSLRHDM LCDSMDEGKG IASGERIWTR LRRGEHFSGT CRYRMKDGSS
     LWIEATYLPL GDKDGKISRV SVVSRKSIAD AERQEEVRLL LLGINETGNA VAVSGCDGRI
     VYVNDGFQRM LGFARGDALN QELGELLAGG RPDGGTREEL DRRIACREGF HKDVLVYDRY
     GKPLWVSVMA NSVFDERGTL VNIVDVLTDI TPTKVHEVLQ RRVLQAMVNE ASVVEVMNMV
     CREVERLAPE VAASVLRVDD SGTLRPLAAP SMPDAYSEAL EGMKIGPNVG ACGTAAFLGR
     PVIVPDIATD PLWDDYRHLP LPEDIKACWS SPIKSSDGRV IGTFGFYFRE RRLPDDFHHR
     LVDVCVYLCA LALEREEARA RIRQLAFYDE LTGLPNRNLL LAQAEQSIAR AEPERKRVAV
     LFLDLDRFKQ VNDTLGHPIG DALLRDVAQR LCRLARATDI VGRLSGDEFV MLMPDFEHGR
     LTAAAEHILV ALAQPFSVGG VTLNPSVSIG ISVFPENGRD MDTLLRHADM AMYQAKTAGR
     NRISFFSAEM NRQAQERLAL EAALRDALEA KALRLHYQPQ VGLKNGSLYG VEALARWRHP
     TLGDISPVRF VPLAEECGLI GDLGDWALRE ACSQLAIWRS NGLRVPSVSV NLSATNFHNL
     NLPRMIAATL AEFGLAPADL MLEITEGVVL DATAGTLRTI AELHRLGVRL SMDDFGTGYS
     SLGHLRRLIV DELKLDRSFV QGLESDDAAR ALTSAVIRIG ESLSLPVVAE GVENEEQRRF
     LIEQGCAAGQ GFLFSPPLPA GELEEWLRGR
//
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