ID D5BVC4_NITHN Unreviewed; 385 AA.
AC D5BVC4;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADE13552.1};
GN OrderedLocusNames=Nhal_0358 {ECO:0000313|EMBL:ADE13552.1};
OS Nitrosococcus halophilus (strain Nc4).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Nitrosococcus.
OX NCBI_TaxID=472759 {ECO:0000313|EMBL:ADE13552.1, ECO:0000313|Proteomes:UP000001844};
RN [1] {ECO:0000313|Proteomes:UP000001844}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nc4 {ECO:0000313|Proteomes:UP000001844};
RG US DOE Joint Genome Institute;
RA Campbell M.A., Malfatti S.A., Chain P.S.G., Heidelberg J.F., Ward B.B.,
RA Klotz M.G.;
RT "Complete genome sequence of Nitrosococcus halophilus Nc4, a salt-adapted,
RT aerobic obligate ammonia-oxidizing sulfur purple bacterium.";
RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP001798; ADE13552.1; -; Genomic_DNA.
DR RefSeq; WP_013031448.1; NC_013960.1.
DR AlphaFoldDB; D5BVC4; -.
DR STRING; 472759.Nhal_0358; -.
DR KEGG; nhl:Nhal_0358; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_0_0_6; -.
DR OrthoDB; 5754413at2; -.
DR Proteomes; UP000001844; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000001844};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..47
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 170..281
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 294..362
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT REGION 220..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 385 AA; 44363 MW; 4FDDBCDEB2A274E1 CRC64;
MVTQRAYKFR FYPTPTQKRQ LAIEFGHARY VWNWALERRT KAYKAQGESL NTIRLSRQLT
VLKQTECPWL SEATASCHTQ KLRDQDRAFK NFFAGRGKYP RFKRRHQTQS VRYQLDQRHV
AKNFNAESKL LKLPKLGTLK LKWSQRMGGI PKMVTVSKDP AGRYFVSMAC EVEIAALPAR
KNAVGVDVGV KDVVVTSSGD KSGAPKYTYQ YARQLKKAQR RLSKKKKGSQ RRRRQQQRVA
RIHARIADSR RDFLNQQSSK LINENQVICL EDLNIKGMLR NRRLSKAVAD CGLYELRRQI
ECKAKWYGRE VLIVDRWAPT SKRCSECGTI QESMPLKVRE WECPDCGTEH DRDINAAKNV
LRWGTAGSAE TDKARGAVKT PRAVA
//
