ID D5ENJ6_CORAD Unreviewed; 323 AA.
AC D5ENJ6;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=DNA ligase I, ATP-dependent Dnl1 {ECO:0000313|EMBL:ADE55472.1};
GN OrderedLocusNames=Caka_2456 {ECO:0000313|EMBL:ADE55472.1};
OS Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 /
OS KCTC 12865 / 04OKA010-24).
OC Bacteria; Verrucomicrobiota; Opitutae; Puniceicoccales;
OC Coraliomargaritaceae; Coraliomargarita.
OX NCBI_TaxID=583355 {ECO:0000313|EMBL:ADE55472.1, ECO:0000313|Proteomes:UP000000925};
RN [1] {ECO:0000313|EMBL:ADE55472.1, ECO:0000313|Proteomes:UP000000925}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865
RC {ECO:0000313|Proteomes:UP000000925};
RX PubMed=21304713; DOI=10.4056/sigs.952166;
RA Mavromatis K., Abt B., Brambilla E., Lapidus A., Copeland A., Deshpande S.,
RA Nolan M., Lucas S., Tice H., Cheng J.F., Han C., Detter J.C., Woyke T.,
RA Goodwin L., Pitluck S., Held B., Brettin T., Tapia R., Ivanova N.,
RA Mikhailova N., Pati A., Liolios K., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Bristow J.,
RA Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P., Kyrpides N.C.;
RT "Complete genome sequence of Coraliomargarita akajimensis type strain
RT (04OKA010-24).";
RL Stand. Genomic Sci. 2:290-299(2010).
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DR EMBL; CP001998; ADE55472.1; -; Genomic_DNA.
DR RefSeq; WP_013044194.1; NC_014008.1.
DR AlphaFoldDB; D5ENJ6; -.
DR STRING; 583355.Caka_2456; -.
DR KEGG; caa:Caka_2456; -.
DR eggNOG; COG1236; Bacteria.
DR HOGENOM; CLU_050517_0_0_0; -.
DR OMA; FYIDPWR; -.
DR OrthoDB; 9802472at2; -.
DR Proteomes; UP000000925; Chromosome.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR PANTHER; PTHR11203:SF49; BLL1145 PROTEIN; 1.
DR PANTHER; PTHR11203; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER; 1.
DR Pfam; PF07521; RMMBL; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:ADE55472.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000925}.
FT DOMAIN 267..310
FT /note="Zn-dependent metallo-hydrolase RNA specificity"
FT /evidence="ECO:0000259|Pfam:PF07521"
SQ SEQUENCE 323 AA; 36435 MW; B3548CAF20CDE4E2 CRC64;
MFKPRYRGGL LIPELSLWMD AARPKPFSVI SHAHGDHVAR HESFLCTPAT LDLIRVRHGE
RFAQRGSALP FGEWRELRTC RMRFWPAGHV LGSAMVEVES DRHGSLLYTG DFKLAQGLAA
EAIQVPEVDV LVMETTFGRP NYRFPSVETV RADLLCFCQQ SLGAGMIPVL LAYSLGKAQE
VLMLLEGIGV PLMVHRTIEQ LNQVYRFHGV DIPDTRPLDF LNMQGCVVLM PPSVLKKLPR
ENCRVAMVSG WGLDDSARYR YKADEVIPLS DHADYPGLIE LVKRVKPQKV YTLHGYDADF
ASDLRSQGWD AWSLSGRDQL ELF
//