ID D5GKM7_TUBMM Unreviewed; 524 AA.
AC D5GKM7;
DT 15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT 15-JUN-2010, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE RecName: Full=Pre-mRNA-processing protein 45 {ECO:0000256|ARBA:ARBA00022160, ECO:0000256|RuleBase:RU367140};
GN ORFNames=GSTUM_00009646001 {ECO:0000313|EMBL:CAZ85070.1};
OS Tuber melanosporum (strain Mel28) (Perigord black truffle).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes;
OC Pezizales; Tuberaceae; Tuber.
OX NCBI_TaxID=656061 {ECO:0000313|EMBL:CAZ85070.1, ECO:0000313|Proteomes:UP000006911};
RN [1] {ECO:0000313|EMBL:CAZ85070.1, ECO:0000313|Proteomes:UP000006911}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Mel28 {ECO:0000313|EMBL:CAZ85070.1,
RC ECO:0000313|Proteomes:UP000006911};
RX PubMed=20348908; DOI=10.1038/nature08867;
RA Martin F., Kohler A., Murat C., Balestrini R., Coutinho P.M., Jaillon O.,
RA Montanini B., Morin E., Noel B., Percudani R., Porcel B., Rubini A.,
RA Amicucci A., Amselem J., Anthouard V., Arcioni S., Artiguenave F.,
RA Aury J.M., Ballario P., Bolchi A., Brenna A., Brun A., Buee M.,
RA Cantarel B., Chevalier G., Couloux A., Da Silva C., Denoeud F.,
RA Duplessis S., Ghignone S., Hilselberger B., Iotti M., Marcais B., Mello A.,
RA Miranda M., Pacioni G., Quesneville H., Riccioni C., Ruotolo R.,
RA Splivallo R., Stocchi V., Tisserant E., Viscomi A.R., Zambonelli A.,
RA Zampieri E., Henrissat B., Lebrun M.H., Paolocci F., Bonfante P.,
RA Ottonello S., Wincker P.;
RT "Perigord black truffle genome uncovers evolutionary origins and mechanisms
RT of symbiosis.";
RL Nature 464:1033-1038(2010).
CC -!- FUNCTION: Involved in pre-mRNA splicing.
CC {ECO:0000256|RuleBase:RU367140}.
CC -!- SUBUNIT: Associated with the spliceosome.
CC {ECO:0000256|RuleBase:RU367140}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367140}.
CC -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197,
CC ECO:0000256|RuleBase:RU367140}.
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DR EMBL; FN430340; CAZ85070.1; -; Genomic_DNA.
DR RefSeq; XP_002840879.1; XM_002840833.1.
DR AlphaFoldDB; D5GKM7; -.
DR STRING; 656061.D5GKM7; -.
DR EnsemblFungi; CAZ85070; CAZ85070; GSTUM_00009646001.
DR GeneID; 9184732; -.
DR KEGG; tml:GSTUM_00009646001; -.
DR eggNOG; KOG2441; Eukaryota.
DR HOGENOM; CLU_006601_2_0_1; -.
DR InParanoid; D5GKM7; -.
DR OMA; YGQRRGW; -.
DR OrthoDB; 5490078at2759; -.
DR Proteomes; UP000006911; Unassembled WGS sequence.
DR GO; GO:0071014; C:post-mRNA release spliceosomal complex; IEA:EnsemblFungi.
DR GO; GO:0000974; C:Prp19 complex; IEA:EnsemblFungi.
DR GO; GO:0060090; F:molecular adaptor activity; IEA:EnsemblFungi.
DR GO; GO:0003723; F:RNA binding; IEA:EnsemblFungi.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:EnsemblFungi.
DR InterPro; IPR017862; SKI-int_prot_SKIP.
DR InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02731; SKIP_SNW; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|RuleBase:RU367140};
KW mRNA splicing {ECO:0000256|RuleBase:RU367140};
KW Nucleus {ECO:0000256|RuleBase:RU367140};
KW Reference proteome {ECO:0000313|Proteomes:UP000006911};
KW Spliceosome {ECO:0000256|RuleBase:RU367140}.
FT DOMAIN 188..345
FT /note="SKI-interacting protein SKIP SNW"
FT /evidence="ECO:0000259|Pfam:PF02731"
FT REGION 1..76
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 496..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..515
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 524 AA; 57856 MW; 64F5E52D8948C65F CRC64;
MTSLAAGLSK ALPAPKYSAE EDVTASRKPT ARVLGGGDPD QQGLILKRTG PPPYGRRSAW
RPRSADDFGD GGAFPEVPMA QYPLDMGRKR SGTSKALTLQ VDNEGKVKYD AIARQGHNDK
RIVHASFKDL IPLRQRADVG EISLERPSEE DVAATTEKTR QALARLVSGA VAAQKPKNVK
GTNRKDAQYV RYTPSNQLGD TTKRSDKIIK IVERQQDPME PPKFKHKKIP RGPPSPPPPV
MHSPPRKLTA ADQEAWTIPP PVSNWKNPKG YTVPLDKRLA ADGRGLQDVT INDKFAQFAE
ALFTADRHAR EEIKQRALMQ QKLAEKEKSQ KEEHLRMLAQ KAREAAHTDS RSDDEARKMQ
MLAREQGRDI GEKIALGLAK PTQSQETMWD SRLFNQSSAF GAGSGFNEDQ PYDKPLFAAQ
EAANSIYRPK VSVDDDDEDT ARSEMDRIKR NSRFEVLGKA QQGFRGAADA EARDGPVQFE
KDAADPFGVE AFVKAAGEKA GTKHGLQERD SSPGGSKRSR ANYM
//