ID D5UJY5_CELFN Unreviewed; 522 AA.
AC D5UJY5;
DT 13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT 13-JUL-2010, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=DNA ligase D, 3'-phosphoesterase domain protein {ECO:0000313|EMBL:ADG73727.1};
GN OrderedLocusNames=Cfla_0817 {ECO:0000313|EMBL:ADG73727.1};
OS Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM
OS 18109 / NBRC 3775 / NCIMB 8073 / NRS 134).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Cellulomonadaceae;
OC Cellulomonas.
OX NCBI_TaxID=446466 {ECO:0000313|EMBL:ADG73727.1, ECO:0000313|Proteomes:UP000000849};
RN [1] {ECO:0000313|EMBL:ADG73727.1, ECO:0000313|Proteomes:UP000000849}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 /
RC NCIMB 8073 / NRS 134 {ECO:0000313|Proteomes:UP000000849};
RX PubMed=21304688; DOI=10.4056/sigs.1012662;
RA Abt B., Foster B., Lapidus A., Clum A., Sun H., Pukall R., Lucas S.,
RA Glavina Del Rio T., Nolan M., Tice H., Cheng J.F., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Goodwin L., Chen A.,
RA Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Rohde M.,
RA Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Cellulomonas flavigena type strain (134).";
RL Stand. Genomic Sci. 3:15-25(2010).
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DR EMBL; CP001964; ADG73727.1; -; Genomic_DNA.
DR AlphaFoldDB; D5UJY5; -.
DR STRING; 446466.Cfla_0817; -.
DR KEGG; cfl:Cfla_0817; -.
DR eggNOG; COG1793; Bacteria.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_6_1_11; -.
DR OrthoDB; 9802472at2; -.
DR Proteomes; UP000000849; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014144; LigD_PE_domain.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02777; LigD_PE_dom; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; MULTIFUNCTIONAL NON-HOMOLOGOUS END JOINING DNA REPAIR PROTEIN LIGD; 1.
DR Pfam; PF13298; LigD_N; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:ADG73727.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000000849}.
FT DOMAIN 28..135
FT /note="DNA ligase D 3'-phosphoesterase"
FT /evidence="ECO:0000259|Pfam:PF13298"
FT DOMAIN 253..508
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 522 AA; 58106 MW; 3E54336F185F568A CRC64;
MRDFTRTAEP EGAPPAPSDA PERRFVVQRH RARRLHYDVR FEVDGVLVSW AVPKGPTLDP
TARRMAVHVE DHPLEYEAFE GVIPRGQYGG GDVIVWDRGT WRPYKTDDPA AEIRGGQLHA
ELFGERLRGK FLLVRRDGEG RGTEQWLMFH KRDEHAVEGW DAEDHPTSVV SGRTNDEVAA
HPDHLWRSGV PAAEAEVDTH PPVPEVAAPS DDELAALDEL GTAGTWEVFG RRLKVTNLDK
ELFAGRDGGP PVTKRELLRY AARIAPVALP YLAGRALNMH RFPQGAGTAG FWHKQLPDHA
PAWVPRWDRP DVDPGESTTY LVVDEPAALV WAANFGALEW HAWTSRTSAP DLPTYALVDL
DPGPATAWED LVLLAGLHRD AFEHVGVRAY PKLTGRRGIQ VWVPITVGPS FDETRAWVER
LSRTVGKVVP DLVSWRWEVR ERGGQARLDY TQNAVNKTLV APYSPRAAAG APVSAPITWD
ELDDPDLRSD TFTVRTVLDR LAERGDPFRG VLAADQHLPP LT
//
