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Database: UniProt
Entry: D6D1Y6_9BACE
LinkDB: D6D1Y6_9BACE
Original site: D6D1Y6_9BACE 
ID   D6D1Y6_9BACE            Unreviewed;       392 AA.
AC   D6D1Y6;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   27-MAR-2024, entry version 65.
DE   SubName: Full=SAM-dependent methyltransferase {ECO:0000313|EMBL:CBK68438.1};
DE            EC=2.1.1.- {ECO:0000313|EMBL:CBK68438.1};
GN   ORFNames=BXY_34440 {ECO:0000313|EMBL:CBK68438.1};
OS   Bacteroides xylanisolvens XB1A.
OC   Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=657309 {ECO:0000313|EMBL:CBK68438.1, ECO:0000313|Proteomes:UP000008795};
RN   [1] {ECO:0000313|EMBL:CBK68438.1, ECO:0000313|Proteomes:UP000008795}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=XB1A {ECO:0000313|EMBL:CBK68438.1,
RC   ECO:0000313|Proteomes:UP000008795};
RG   metaHIT consortium -- http://www.metahit.eu/;
RA   Pajon A., Turner K., Parkhill J., Bernalier A.;
RT   "The genome sequence of Bacteriodes xylanisolvens XB1A.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CBK68438.1, ECO:0000313|Proteomes:UP000008795}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=XB1A {ECO:0000313|EMBL:CBK68438.1,
RC   ECO:0000313|Proteomes:UP000008795};
RA   Pajon A.;
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   -!- SIMILARITY: Belongs to the methyltransferase superfamily. RlmI family.
CC       {ECO:0000256|ARBA:ARBA00038091}.
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DR   EMBL; FP929033; CBK68438.1; -; Genomic_DNA.
DR   RefSeq; WP_004315432.1; NC_021017.1.
DR   AlphaFoldDB; D6D1Y6; -.
DR   GeneID; 69483841; -.
DR   KEGG; bxy:BXY_34440; -.
DR   PATRIC; fig|657309.4.peg.2290; -.
DR   eggNOG; COG1092; Bacteria.
DR   HOGENOM; CLU_014042_0_0_10; -.
DR   Proteomes; UP000008795; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   CDD; cd02440; AdoMet_MTases; 1.
DR   CDD; cd21153; PUA_RlmI; 1.
DR   CDD; cd11572; RlmI_M_like; 1.
DR   Gene3D; 2.30.130.10; PUA domain; 1.
DR   Gene3D; 3.30.750.80; RNA methyltransferase domain (HRMD) like; 1.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   InterPro; IPR002478; PUA.
DR   InterPro; IPR015947; PUA-like_sf.
DR   InterPro; IPR036974; PUA_sf.
DR   InterPro; IPR041532; RlmI-like_PUA.
DR   InterPro; IPR019614; SAM-dep_methyl-trfase.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   PANTHER; PTHR42873:SF1; METHYLTRANS_SAM DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR42873; RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE; 1.
DR   Pfam; PF10672; Methyltrans_SAM; 1.
DR   Pfam; PF17785; PUA_3; 1.
DR   SMART; SM00359; PUA; 1.
DR   SUPFAM; SSF88697; PUA domain-like; 1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR   PROSITE; PS50890; PUA; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603,
KW   ECO:0000313|EMBL:CBK68438.1}; RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   rRNA processing {ECO:0000256|ARBA:ARBA00022552};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:CBK68438.1}.
FT   DOMAIN          2..85
FT                   /note="PUA"
FT                   /evidence="ECO:0000259|SMART:SM00359"
SQ   SEQUENCE   392 AA;  44297 MW;  164BF1EBE3405373 CRC64;
     MHKVYLKPGK EDSLKRFHPW IFSGAIARFD GEPDEGEVVE VYTSKKEFIA EGHFQIGSIA
     VRVLSFHQEP IDHDFWKRKL EIAYDMRRSI GIATNPTNNT YRLVHGEGDN LPGLVIDVYA
     KTAVMQAHSA GMHVDRMTIA EALSEVMGDK IENIYYKSET TLPFKADLFP ENGFLKGGSS
     DNIAQEYGLQ FHVDWLKGQK TGFFVDQREN RSLLERYAKD RSVLNMFCYT GGFSFYAMRG
     GAKLVHSVDS SAKAIDLTNK NVELNFPGDS RHEAFAEDAF KYLDRMGDQY DLIILDPPAF
     AKHKDALRNA LQGYRKLNAK AFEKIKPGGI LFTFSCSQVV SKDNFRTAVF TAAAMSGRSV
     RILHQLTQPA DHPVNIYHPE GEYLKGLVLY VE
//
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