ID D6YQ86_PANVC Unreviewed; 294 AA.
AC D6YQ86;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:ADI78169.1};
GN Name=oxyR {ECO:0000313|EMBL:ADI78169.1};
GN OrderedLocusNames=Pvag_pPag30100 {ECO:0000313|EMBL:ADI78169.1};
OS Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)).
OG Plasmid pPag3 {ECO:0000313|EMBL:ADI78169.1,
OG ECO:0000313|Proteomes:UP000006631}.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Pantoea.
OX NCBI_TaxID=712898 {ECO:0000313|EMBL:ADI78169.1, ECO:0000313|Proteomes:UP000006631};
RN [1] {ECO:0000313|EMBL:ADI78169.1, ECO:0000313|Proteomes:UP000006631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C9-1 {ECO:0000313|EMBL:ADI78169.1,
RC ECO:0000313|Proteomes:UP000006631};
RC PLASMID=pPag3 {ECO:0000313|EMBL:ADI78169.1};
RX PubMed=20487014; DOI=10.1111/j.1574-6968.2010.01994.x;
RA Smits T.H., Rezzonico F., Pelludat C., Goesmann A., Frey J.E., Duffy B.;
RT "Genomic and phenotypic characterization of a nonpigmented variant of
RT Pantoea vagans biocontrol strain C9-1 lacking the 530-kb megaplasmid
RT pPag3.";
RL FEMS Microbiol. Lett. 308:48-54(2010).
RN [2] {ECO:0000313|EMBL:ADI78169.1, ECO:0000313|Proteomes:UP000006631}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C9-1 {ECO:0000313|EMBL:ADI78169.1,
RC ECO:0000313|Proteomes:UP000006631};
RC PLASMID=pPag3 {ECO:0000313|EMBL:ADI78169.1};
RX PubMed=20952567; DOI=10.1128/JB.01122-10;
RA Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A.,
RA Stockwell V.O., Frey J.E., Duffy B.;
RT "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1.";
RL J. Bacteriol. 192:6486-6487(2010).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP001895; ADI78169.1; -; Genomic_DNA.
DR AlphaFoldDB; D6YQ86; -.
DR KEGG; pva:Pvag_pPag30100; -.
DR HOGENOM; CLU_039613_6_2_6; -.
DR Proteomes; UP000006631; Plasmid pPag3.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30419:SF24; HTH-TYPE TRANSCRIPTIONAL REGULATOR CZCR; 1.
DR PANTHER; PTHR30419; HTH-TYPE TRANSCRIPTIONAL REGULATOR YBHD; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:ADI78169.1}.
FT DOMAIN 2..59
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 294 AA; 31703 MW; 9C5727EA73062AA8 CRC64;
MMNLVHWRLM VAVADVRNIS RAAEATGMTQ SAASQAIAQL ESLLGFPVFV RERRHISVTA
LGEQVIEHAR TMLVQLNAIR ELADESRGLQ GGRIRLASFP SVTSTLLPGL LRNVRRLYPG
IEVVVLEGTD EEVEEWLAAD TVELGVVMNP APGRADVILG RDAWVAVMPV SYPQSGANGI
TLQELADQPF VLATGGCVVN GKSLIEQAGL QLSDVRIKVR DWISACMLVR ENMGVALVPE
SALPAERRGL SVVPITPAIH REFGLVCSLS GKASDVTQAL LKGMRKRLSK EAAS
//
