ID D7CLI4_SYNLT Unreviewed; 703 AA.
AC D7CLI4;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Stage V sporulation protein D {ECO:0000313|EMBL:ADI01569.1};
DE EC=2.4.1.129 {ECO:0000313|EMBL:ADI01569.1};
GN OrderedLocusNames=Slip_0789 {ECO:0000313|EMBL:ADI01569.1};
OS Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae;
OC Syntrophothermus.
OX NCBI_TaxID=643648 {ECO:0000313|EMBL:ADI01569.1, ECO:0000313|Proteomes:UP000000378};
RN [1] {ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX DOI=10.4056/sigs.1233249;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Djao O., Zhang X., Lucas S., Lapidus A., Glavina Del Rio T., Nolan M.,
RA Tice H., Cheng J., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.,
RA Jeffries C., Rohde M., Sikorski J., Spring S., Goker M., Detter J.,
RA Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N.,
RA Klenk H.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1T).";
RL Stand. Genomic Sci. 3:267-275(2010).
RN [2] {ECO:0000313|EMBL:ADI01569.1, ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX PubMed=21304731;
RA Djao O.D., Zhang X., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Rohde M., Sikorski J., Spring S., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1).";
RL Stand. Genomic Sci. 3:268-275(2010).
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
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DR EMBL; CP002048; ADI01569.1; -; Genomic_DNA.
DR RefSeq; WP_013174971.1; NC_014220.1.
DR AlphaFoldDB; D7CLI4; -.
DR STRING; 643648.Slip_0789; -.
DR KEGG; slp:Slip_0789; -.
DR eggNOG; COG0768; Bacteria.
DR eggNOG; COG2815; Bacteria.
DR HOGENOM; CLU_009289_6_0_9; -.
DR OrthoDB; 9804124at2; -.
DR Proteomes; UP000000378; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0008955; F:peptidoglycan glycosyltransferase activity; IEA:UniProtKB-EC.
DR CDD; cd06576; PASTA_Pbp2x-like_1; 1.
DR CDD; cd06575; PASTA_Pbp2x-like_2; 1.
DR Gene3D; 3.30.10.20; -; 2.
DR Gene3D; 3.30.450.330; -; 1.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR011927; SpoVD_pbp.
DR NCBIfam; TIGR02214; spoVD_pbp; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF1; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; 1.
DR Pfam; PF03793; PASTA; 2.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 2.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 2.
DR PROSITE; PS51178; PASTA; 2.
PE 3: Inferred from homology;
KW Glycosyltransferase {ECO:0000313|EMBL:ADI01569.1};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000378};
KW Transferase {ECO:0000313|EMBL:ADI01569.1};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 576..636
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
FT DOMAIN 642..701
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 703 AA; 76828 MW; BAF8BF98A8089846 CRC64;
MQTTNLAIRK RIVTLFLFFI LGFLGLMGRM FWVQIVRGAE LSEKALENRM RDVPVKAKRG
VVYDRNGREL AISVSADSVY ANPAEVRKSG RAEEIAHTLA QILGLEEENV YQRITKVSGF
EWIKRQVDFK TSAQLKKLDL PGIGLVEESR RFYPKKSLAC HVLGISSIDN IGLEGVDRQY
NDIIGGIPGR IVIEHDAVGR EIPEATHRYI PPTDGASVVL TIDETIQYIV ERELDRVWEA
RKPKGAIAVV MDPRTGEVLA MANRPCFDPN DYKQYPEVNR RNLAIWYAYE PGSTMKIVTA
AAGLEEGVVR PNSRFFCPGS IKVGKETISC SQGRAHGAQT FVEVVEHSCN VGFVSLGLEL
GLDKYYQYLN AFGFGQKTGI DLPGEAKGIL VPRTRAKQID LATMAMGQAN AVTPIQLLTA
VSTVANDGVM MKPHLLKEVL DADGKVVKRV EPEPVRQVIS KATARELALI LEGVVQNGTG
QNAYIEGYRV AGKTGTAQKI SPSGGYLPNE YVASFVGFAP ANNPRLACIV VIDAPQGYPY
YGGTVAAPVF REIMRDSLRY LEVPLQGVPK VEKGETKETV SVPDVVNLTL DDALTIIKRQ
GLEVQVEGSG DLIWSQAPRA YSKVKKGTKV IVYLSEVNQQ AGEEEVTVPD LQGKSMREVA
RILAKIGLHM EPQGYGLAAK QNPAPGAVVK SGSVVVVEFG PAP
//
