ID D7CPH2_SYNLT Unreviewed; 340 AA.
AC D7CPH2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ADI02607.1};
GN OrderedLocusNames=Slip_1853 {ECO:0000313|EMBL:ADI02607.1};
OS Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae;
OC Syntrophothermus.
OX NCBI_TaxID=643648 {ECO:0000313|EMBL:ADI02607.1, ECO:0000313|Proteomes:UP000000378};
RN [1] {ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX DOI=10.4056/sigs.1233249;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Djao O., Zhang X., Lucas S., Lapidus A., Glavina Del Rio T., Nolan M.,
RA Tice H., Cheng J., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.,
RA Jeffries C., Rohde M., Sikorski J., Spring S., Goker M., Detter J.,
RA Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N.,
RA Klenk H.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1T).";
RL Stand. Genomic Sci. 3:267-275(2010).
RN [2] {ECO:0000313|EMBL:ADI02607.1, ECO:0000313|Proteomes:UP000000378}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12680 / TGB-C1 {ECO:0000313|Proteomes:UP000000378};
RX PubMed=21304731;
RA Djao O.D., Zhang X., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA Cheng J.F., Han C., Tapia R., Goodwin L., Pitluck S., Liolios K.,
RA Ivanova N., Mavromatis K., Mikhailova N., Ovchinnikova G., Pati A.,
RA Brambilla E., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J.,
RA Jeffries C.D., Rohde M., Sikorski J., Spring S., Goker M., Detter J.C.,
RA Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA Kyrpides N.C., Klenk H.P.;
RT "Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-
RT C1).";
RL Stand. Genomic Sci. 3:268-275(2010).
CC -!- SIMILARITY: Belongs to the SorC transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00010466}.
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DR EMBL; CP002048; ADI02607.1; -; Genomic_DNA.
DR RefSeq; WP_013176009.1; NC_014220.1.
DR AlphaFoldDB; D7CPH2; -.
DR STRING; 643648.Slip_1853; -.
DR KEGG; slp:Slip_1853; -.
DR eggNOG; COG2390; Bacteria.
DR HOGENOM; CLU_054506_2_0_9; -.
DR OrthoDB; 9793820at2; -.
DR Proteomes; UP000000378; Chromosome.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1360; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR048715; CggR_N.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR007324; Sugar-bd_dom_put.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR34294:SF5; CENTRAL GLYCOLYTIC GENES REGULATOR; 1.
DR PANTHER; PTHR34294; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF21715; CggR_N; 1.
DR Pfam; PF04198; Sugar-bind; 1.
DR SUPFAM; SSF100950; NagB/RpiA/CoA transferase-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000378}.
FT DOMAIN 18..87
FT /note="CggR N-terminal DNA binding"
FT /evidence="ECO:0000259|Pfam:PF21715"
FT DOMAIN 93..337
FT /note="Sugar-binding"
FT /evidence="ECO:0000259|Pfam:PF04198"
SQ SEQUENCE 340 AA; 37095 MW; 00B0769EDEC0F908 CRC64;
MEKMVLVLER IAPELLYIVK LRYSILREIL HHQPVGRRQI AKRIGCSERS VRGEVENLRE
KGALVISPSG ISLTEYGREL IEEADEIICY LEKLNTLAAQ LQEEFSLEQV IIVPGDSSRD
IYAKKDIGRA AARCLKESLY DGCRVAVTGG TTLAEVAHSM SGVVTARDVL VVPARGGLGG
EVEEQANVVA ARIAKAIGAE YRLLHLPDNL EESLLESLKK DARIKEVVEL VKSCNILVHG
IGVALEMAAR RGLSPEGLQV LEERGAVGEV LRYYFNREGQ IVYSQPGIGI EFEDMGGLKK
VIAVAGGSNK AEAIAAVLRN HRRGVLVTDE GAARKILQKG
//
