ID D7DKM2_METV0 Unreviewed; 202 AA.
AC D7DKM2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=Ubiquinone biosynthesis accessory factor UbiJ {ECO:0000256|HAMAP-Rule:MF_02215};
GN Name=ubiJ {ECO:0000256|HAMAP-Rule:MF_02215};
GN OrderedLocusNames=M301_2099 {ECO:0000313|EMBL:ADI30468.1};
OS Methylotenera versatilis (strain 301).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Methylophilaceae; Methylotenera.
OX NCBI_TaxID=666681 {ECO:0000313|EMBL:ADI30468.1, ECO:0000313|Proteomes:UP000000383};
RN [1] {ECO:0000313|Proteomes:UP000000383}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=301 {ECO:0000313|Proteomes:UP000000383};
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Clum A., Land M., Hauser L., Kyrpides N., Ivanova N.,
RA Chistoservova L., Kalyuzhnaya M., Woyke T.;
RT "Complete sequence of Methylotenera sp. 301.";
RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ADI30468.1, ECO:0000313|Proteomes:UP000000383}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=301 {ECO:0000313|EMBL:ADI30468.1,
RC ECO:0000313|Proteomes:UP000000383};
RX PubMed=21622745; DOI=10.1128/JB.00404-11;
RA Lapidus A., Clum A., Labutti K., Kaluzhnaya M.G., Lim S., Beck D.A.,
RA Glavina Del Rio T., Nolan M., Mavromatis K., Huntemann M., Lucas S.,
RA Lidstrom M.E., Ivanova N., Chistoserdova L.;
RT "Genomes of three methylotrophs from a single niche uncover genetic and
RT metabolic divergence of Methylophilaceae.";
RL J. Bacteriol. 193:3757-3764(2011).
CC -!- FUNCTION: Required for ubiquinone (coenzyme Q) biosynthesis. Binds
CC hydrophobic ubiquinone biosynthetic intermediates via its SCP2 domain
CC and is essential for the stability of the Ubi complex. May constitute a
CC docking platform where Ubi enzymes assemble and access their SCP2-bound
CC polyprenyl substrates. {ECO:0000256|HAMAP-Rule:MF_02215}.
CC -!- PATHWAY: Cofactor biosynthesis; ubiquinone biosynthesis.
CC {ECO:0000256|HAMAP-Rule:MF_02215}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_02215}.
CC -!- SIMILARITY: Belongs to the UbiJ family. {ECO:0000256|HAMAP-
CC Rule:MF_02215}.
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DR EMBL; CP002056; ADI30468.1; -; Genomic_DNA.
DR RefSeq; WP_013148777.1; NC_014207.1.
DR AlphaFoldDB; D7DKM2; -.
DR STRING; 666681.M301_2099; -.
DR KEGG; meh:M301_2099; -.
DR eggNOG; COG3165; Bacteria.
DR HOGENOM; CLU_100130_0_0_4; -.
DR OrthoDB; 8525483at2; -.
DR UniPathway; UPA00232; -.
DR Proteomes; UP000000383; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0032150; P:ubiquinone biosynthetic process from chorismate; IEA:InterPro.
DR HAMAP; MF_02215; UbiJ; 1.
DR InterPro; IPR003033; SCP2_sterol-bd_dom.
DR InterPro; IPR036527; SCP2_sterol-bd_dom_sf.
DR InterPro; IPR038989; UbiJ.
DR PANTHER; PTHR38693:SF1; UBIQUINONE BIOSYNTHESIS ACCESSORY FACTOR UBIJ; 1.
DR PANTHER; PTHR38693; UBIQUINONE BIOSYNTHESIS PROTEIN UBIJ; 1.
DR Pfam; PF02036; SCP2; 1.
DR SUPFAM; SSF55718; SCP-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|HAMAP-Rule:MF_02215};
KW Reference proteome {ECO:0000313|Proteomes:UP000000383};
KW Ubiquinone biosynthesis {ECO:0000256|HAMAP-Rule:MF_02215}.
FT DOMAIN 10..101
FT /note="SCP2"
FT /evidence="ECO:0000259|Pfam:PF02036"
SQ SEQUENCE 202 AA; 22375 MW; E2BEB4D8C0E425EE CRC64;
MLKALSTRLL QHLISQNSWA SNLLKPFAGR SIQINVSFIS ASLVILENGN LAMAGETNVP
DAKVTIPPSL LLRLLAKDET ANRQINIEGD TQLVAELAKV FSNMRWDYED DLSSLIGDIP
ANKIGTFARD AANSVKETSI NLAEMLSEYW QEEMPLIAKK RHVEQFNAEV DILGADVARF
EKRLAKLTKS IKANLDNGLL KN
//