ID D7JFK8_9BACT Unreviewed; 378 AA.
AC D7JFK8;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Endopeptidase LytF {ECO:0000313|EMBL:EFI17677.1};
GN ORFNames=HMPREF0156_01275 {ECO:0000313|EMBL:EFI17677.1};
OS Bacteroidetes oral taxon 274 str. F0058.
OC Bacteria; Bacteroidota.
OX NCBI_TaxID=575590 {ECO:0000313|EMBL:EFI17677.1, ECO:0000313|Proteomes:UP000004685};
RN [1] {ECO:0000313|Proteomes:UP000004685}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0058 {ECO:0000313|Proteomes:UP000004685};
RG The Broad Institute Genome Sequencing Platform;
RA Ward D., Earl A., Feldgarden M., Gevers D., Young S.K., Zeng Q.,
RA Koehrsen M., Alvarado L., Berlin A., Bochicchio J., Borenstein D.,
RA Chapman S.B., Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J.,
RA Griggs A., Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D.,
RA Larson L., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T.,
RA Shenoy N., Sisk P., Stolte C., Sykes S., Thomson T., Walk T., White J.,
RA Yandava C., Izard J., Baranova O.V., Blanton J.M., Tanner A.C.,
RA Dewhirst F.E., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Bacteroidetes bacterium Oral taxon 274 strain
RT F0058.";
RL Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase C40 family.
CC {ECO:0000256|ARBA:ARBA00007074}.
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DR EMBL; GG774889; EFI17677.1; -; Genomic_DNA.
DR AlphaFoldDB; D7JFK8; -.
DR STRING; 575590.HMPREF0156_01275; -.
DR eggNOG; COG0791; Bacteria.
DR eggNOG; COG1388; Bacteria.
DR HOGENOM; CLU_730870_0_0_10; -.
DR OrthoDB; 9807055at2; -.
DR Proteomes; UP000004685; Unassembled WGS sequence.
DR CDD; cd00118; LysM; 2.
DR Gene3D; 3.90.1720.10; endopeptidase domain like (from Nostoc punctiforme); 1.
DR Gene3D; 3.10.350.10; LysM domain; 2.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR000064; NLP_P60_dom.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR PANTHER; PTHR47053; MUREIN DD-ENDOPEPTIDASE MEPH-RELATED; 1.
DR PANTHER; PTHR47053:SF1; MUREIN DD-ENDOPEPTIDASE MEPH-RELATED; 1.
DR Pfam; PF01476; LysM; 2.
DR Pfam; PF00877; NLPC_P60; 1.
DR SMART; SM00257; LysM; 2.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF54106; LysM domain; 2.
DR PROSITE; PS51782; LYSM; 2.
DR PROSITE; PS51935; NLPC_P60; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004685};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..378
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003100369"
FT DOMAIN 45..174
FT /note="NlpC/P60"
FT /evidence="ECO:0000259|PROSITE:PS51935"
FT DOMAIN 217..260
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 333..376
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT REGION 271..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..326
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 378 AA; 42082 MW; EACF0A1BE9C1258A CRC64;
MNFRKTIITA LLIGVCVGVC ANTGSENDIF GKSRKKHKKT TYSVDNKIDS IIKFSRTFLG
TPYRYGGSSP RGFDCSGFMV YVFKNFSIDL PRTGTEQYHS YASVPRHNIR KGDLVFFAGR
RHGKRIGHVG MVISDTIENG RFRFIHSSTQ SGIVISDSDE PYYEDRYISA CRIFPYGIEV
VPETPASAKH KAKISTDDII SAIAASSSTS SSAEAAVYHT VKRGETLFAI ARRYGTTVDA
ICKLNDIDAG NIKKGQKLLI RQSEVALSPE VSDMEEEIEE EQYAEIKTSK PAKRSETTKT
AKDTKTAKDT KTTKDTKTAK KSDTNKSKKH GTVKHKVVRG ETLYGIAKKY NTTVEKIKKD
NRLKSNNLSV GQKLKIKR
//
