ID D7KES9_ARALL Unreviewed; 814 AA.
AC D7KES9;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=ARALYDRAFT_336125 {ECO:0000313|EMBL:EFH69870.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348713; EFH69870.1; -; Genomic_DNA.
DR RefSeq; XP_002893611.1; XM_002893565.1.
DR AlphaFoldDB; D7KES9; -.
DR STRING; 81972.D7KES9; -.
DR EnsemblPlants; fgenesh1_pg.C_scaffold_1002690; fgenesh1_pg.C_scaffold_1002690; fgenesh1_pg.C_scaffold_1002690.
DR GeneID; 9329672; -.
DR Gramene; fgenesh1_pg.C_scaffold_1002690; fgenesh1_pg.C_scaffold_1002690; fgenesh1_pg.C_scaffold_1002690.
DR KEGG; aly:9329672; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_24_1; -.
DR OrthoDB; 352699at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 11.
DR PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR PANTHER; PTHR47447:SF23; PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 244..278
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 279..313
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 385..419
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 420..454
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 456..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 491..525
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 526..560
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 561..595
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 631..665
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 26..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 76..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..57
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..110
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 814 AA; 92539 MW; 2A99CE9FC4D44543 CRC64;
MLNLRVNRIL RRALIRFSPC SISNGEADDA SFSTSSSKNP HGPEIQGDSS SQEDGHFGEF
SQLGFRKSPA LSATSVGDAE FGEIRNPRFN EIDELGEDED DEEGSVTSGD ECDDDFAVLK
SVGKIPQSRE DVGRFDVEED ESRHPLVREI GRLIGLRSSW NPKHEGQMRN LLRSLKPSQV
CAVLRSQDDE RVALKFFYWA DRQWRYRHDP MVYYSMLEVL SKTKMCQGAR RVLVLMKRRG
IYRTPEAFLR VMVSYSRAGQ LRDALKVLTL MQRAGVEPNL LICNTTIDVF VRANRLEKAL
RFLERMQVVG IVPNVVTYNC MIRGYCDLHR VEEAIELLDD MPSKGCLPDK VSYYTIMGYL
CKEKRIVEVR DLMKKMAKEH GLVRDQVTYN TLIHMLTKHD HADEALWFLK DAEEKGFRID
KVGYSAIVHA LCKEGRMSEA KDLINEMLSK GHCPPDVVTY TAVVNGFCRL GEVDKAKKLL
QIMHTHGYKP NTVSYTALLN GLCRTGKSLE AREMMNMSEE QWWSPNSITY SVLMHGLRKE
GKLSEACDVV REMVLKGFFP GPVEINLLLQ SLCRDGRTHE ARKFMEECLN KGCAINVVNF
TTVIHGFCQN DELDAALSVL DDMYLINKHA DVFTYTTLVD ALGKKGRIAE ATELMKKMLH
KGIDPTPVTY RTVIHRYCQM EKVDDLVAIL EKMILRQKCK TIYNQVIEKL CGLGKLEEAD
KLLGKVLRTA SRSDAKTCYA LMEGYLKIGV PLLAYKVACR MFNRNLIPDV KMCEKLSKRL
VVEGAGNDNN MLLYFSLVSD NLQIPSEATR LSLR
//
