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Database: UniProt
Entry: D7KLI4_ARALL
LinkDB: D7KLI4_ARALL
Original site: D7KLI4_ARALL 
ID   D7KLI4_ARALL            Unreviewed;       428 AA.
AC   D7KLI4;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   08-NOV-2023, entry version 60.
DE   SubName: Full=Clathrin adaptor complexes medium subunit family protein {ECO:0000313|EMBL:EFH66091.1};
GN   ORFNames=ARALYDRAFT_888359 {ECO:0000313|EMBL:EFH66091.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004287};
CC       Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004287};
CC       Cytoplasmic side {ECO:0000256|ARBA:ARBA00004287}.
CC   -!- SIMILARITY: Belongs to the adaptor complexes medium subunit family.
CC       {ECO:0000256|PIRNR:PIRNR005992}.
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DR   EMBL; GL348713; EFH66091.1; -; Genomic_DNA.
DR   RefSeq; XP_002889832.1; XM_002889786.1.
DR   AlphaFoldDB; D7KLI4; -.
DR   STRING; 81972.D7KLI4; -.
DR   EnsemblPlants; scaffold_101153.1; scaffold_101153.1; scaffold_101153.1.
DR   GeneID; 9328657; -.
DR   Gramene; scaffold_101153.1; scaffold_101153.1; scaffold_101153.1.
DR   KEGG; aly:9328657; -.
DR   eggNOG; KOG0937; Eukaryota.
DR   HOGENOM; CLU_026996_0_0_1; -.
DR   OrthoDB; 5353102at2759; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0030131; C:clathrin adaptor complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR   CDD; cd09250; AP-1_Mu1_Cterm; 1.
DR   CDD; cd14835; AP1_Mu_N; 1.
DR   Gene3D; 3.30.450.60; -; 1.
DR   Gene3D; 2.60.40.1170; Mu homology domain, subdomain B; 2.
DR   InterPro; IPR036168; AP2_Mu_C_sf.
DR   InterPro; IPR022775; AP_mu_sigma_su.
DR   InterPro; IPR001392; Clathrin_mu.
DR   InterPro; IPR018240; Clathrin_mu_CS.
DR   InterPro; IPR011012; Longin-like_dom_sf.
DR   InterPro; IPR028565; MHD.
DR   PANTHER; PTHR10529; AP COMPLEX SUBUNIT MU; 1.
DR   PANTHER; PTHR10529:SF369; AP-1 COMPLEX SUBUNIT MU-1; 1.
DR   Pfam; PF00928; Adap_comp_sub; 1.
DR   Pfam; PF01217; Clat_adaptor_s; 1.
DR   PIRSF; PIRSF005992; Clathrin_mu; 1.
DR   PRINTS; PR00314; CLATHRINADPT.
DR   SUPFAM; SSF49447; Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; 1.
DR   SUPFAM; SSF64356; SNARE-like; 1.
DR   PROSITE; PS00991; CLAT_ADAPTOR_M_2; 1.
DR   PROSITE; PS51072; MHD; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Protein transport {ECO:0000256|PIRNR:PIRNR005992};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|PIRNR:PIRNR005992}.
FT   DOMAIN          170..426
FT                   /note="MHD"
FT                   /evidence="ECO:0000259|PROSITE:PS51072"
SQ   SEQUENCE   428 AA;  49103 MW;  1D1859C1B72A6FE4 CRC64;
     MAGAASALFL LDIKGRVLVW RDYRGDVTAA QAERFFTKLI EKEGDSQSND PVAYDNGVTY
     MFVQHSNIYL MIASRQNCNA ASLLFFLHRV VDVFKHYFEE LEEESLRDNF VVVYELLDEM
     MDFGYPQYTE ARILSEFIKT DAYRMEVTQR PPMAVTNAVS WRSEGLQFKK NEVFLDVIES
     VNILVNSNGQ IVRSDVVGAL KMRTYLSGMP ECKLGLNDRV LLEAQGRATK GKAIDLEDIK
     FHQCVRLARF ENDRTISFIP PDGSFDLMTY RLSTQVKPLI WVEAQIERHS RSRVEMLVKA
     RSQFKERSTA TNVEIELPVP TDASNPNVRT SLGSAAYAPE KDALVWKIKS FPGNKEYMLR
     AEFHLPSITA EEATPERKAP IRVKFEIPYF TVSGIQVRYL KIIEKSGYQA LPWVRYITMA
     GEYELRLM
//
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