ID D7KP49_ARALL Unreviewed; 264 AA.
AC D7KP49;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 22-FEB-2023, entry version 50.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=ARALYDRAFT_333453 {ECO:0000313|EMBL:EFH65599.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348713; EFH65599.1; -; Genomic_DNA.
DR RefSeq; XP_002889340.1; XM_002889294.1.
DR AlphaFoldDB; D7KP49; -.
DR STRING; 81972.D7KP49; -.
DR EnsemblPlants; fgenesh1_pg.C_scaffold_1000018; fgenesh1_pg.C_scaffold_1000018; fgenesh1_pg.C_scaffold_1000018.
DR GeneID; 9325404; -.
DR Gramene; fgenesh1_pg.C_scaffold_1000018; fgenesh1_pg.C_scaffold_1000018; fgenesh1_pg.C_scaffold_1000018.
DR KEGG; aly:9325404; -.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_1059042_0_0_1; -.
DR OrthoDB; 4569288at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR47068; OS02G0659100 PROTEIN; 1.
DR PANTHER; PTHR47068:SF1; OS02G0659100 PROTEIN; 1.
DR Pfam; PF13912; zf-C2H2_6; 2.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 92..119
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 165..187
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 105..158
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 126..151
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 264 AA; 29834 MW; 22DFD8F178593EE7 CRC64;
MHGVMNSSCI DFVMFSRGQH DEDNMSRRPW KRERSMPTQH HHHLNLSPNE DEELANCLVL
LSNSGDAHGD HHKQHGHGKA KTVKKQKTAQ VFQCKACKKV FTSHQALGGH RASHKKVKGC
FASQDKEEEE EEEYKEDDDE DEDEDEEEEE DKSTAHIARK RSNAHECTIC HRVFSSGQAL
GGHKRCHWLT PSNYLRMTSL HDHHHSVGRP QPLDQPSLDL NLACQEYSVD PTAMSVGMIE
RDGGGNSHNA TSSSWLKLAS GDWS
//
