ID D7L2T9_ARALL Unreviewed; 278 AA.
AC D7L2T9;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=Protein YIP {ECO:0000256|RuleBase:RU361264};
GN ORFNames=ARALYDRAFT_480849 {ECO:0000313|EMBL:EFH62519.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000256|RuleBase:RU361264}; Multi-pass membrane protein
CC {ECO:0000256|RuleBase:RU361264}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000256|ARBA:ARBA00010596,
CC ECO:0000256|RuleBase:RU361264}.
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DR EMBL; GL348715; EFH62519.1; -; Genomic_DNA.
DR RefSeq; XP_002886260.1; XM_002886214.1.
DR AlphaFoldDB; D7L2T9; -.
DR STRING; 81972.D7L2T9; -.
DR EnsemblPlants; fgenesh2_kg.3__3550__AT2G18840.1; fgenesh2_kg.3__3550__AT2G18840.1; fgenesh2_kg.3__3550__AT2G18840.1.
DR GeneID; 9322326; -.
DR Gramene; fgenesh2_kg.3__3550__AT2G18840.1; fgenesh2_kg.3__3550__AT2G18840.1; fgenesh2_kg.3__3550__AT2G18840.1.
DR KEGG; aly:9322326; -.
DR eggNOG; KOG2946; Eukaryota.
DR HOGENOM; CLU_059592_2_1_1; -.
DR OrthoDB; 1968062at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0032588; C:trans-Golgi network membrane; IEA:EnsemblPlants.
DR GO; GO:0042803; F:protein homodimerization activity; IEA:EnsemblPlants.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0045489; P:pectin biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0052324; P:plant-type cell wall cellulose biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0015774; P:polysaccharide transport; IEA:EnsemblPlants.
DR GO; GO:0051223; P:regulation of protein transport; IEA:EnsemblPlants.
DR GO; GO:0048766; P:root hair initiation; IEA:EnsemblPlants.
DR GO; GO:0009826; P:unidimensional cell growth; IEA:EnsemblPlants.
DR InterPro; IPR045231; Yip1/4-like.
DR InterPro; IPR006977; Yip1_dom.
DR PANTHER; PTHR21236; GOLGI MEMBRANE PROTEIN YIP1; 1.
DR PANTHER; PTHR21236:SF1; PROTEIN YIPF6; 1.
DR Pfam; PF04893; Yip1; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU361264};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU361264};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|RuleBase:RU361264}.
FT TRANSMEM 145..163
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 170..191
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 197..218
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 225..246
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 258..277
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT DOMAIN 140..272
FT /note="Yip1"
FT /evidence="ECO:0000259|Pfam:PF04893"
FT REGION 1..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..72
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 278 AA; 29933 MW; 401F583823A0D26C CRC64;
MSQGDTVPLH PSSQSDIDEI ENLINESVQS GPGTVLAARP PSPTRPSIPV SSSSPFMQSN
LPPLHPSSSA QKVTPVPVPP PLPAVSNSSN FQGASAFGSP PNTLTEPVWD TVKRDLSRIV
SNLKLVVFPN PYREDPGKAL RDWDLWGPFF FIVFLGLTLS WSASVKKSEV FAVAFALLAA
GAVILTLNVL LLGGHIIFFQ SLSLLGYCLF PLDVGAVICM LKDNVILKMV VVSVTLAWSS
WAAYPFMSAA VNPRRKALAL YPVFLMYVSV GFLIIAIN
//
