ID D7LE02_ARALL Unreviewed; 588 AA.
AC D7LE02;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH54873.1};
GN ORFNames=ARALYDRAFT_320079 {ECO:0000313|EMBL:EFH54873.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH54873.1; -; Genomic_DNA.
DR RefSeq; XP_002878614.1; XM_002878568.1.
DR AlphaFoldDB; D7LE02; -.
DR STRING; 81972.D7LE02; -.
DR EnsemblPlants; fgenesh1_pm.C_scaffold_4000136; fgenesh1_pm.C_scaffold_4000136; fgenesh1_pm.C_scaffold_4000136.
DR Gramene; fgenesh1_pm.C_scaffold_4000136; fgenesh1_pm.C_scaffold_4000136; fgenesh1_pm.C_scaffold_4000136.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_5_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 42..76
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 146..180
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 216..250
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 260..294
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 361..395
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 588 AA; 65581 MW; 7019D1829BBDE74A CRC64;
MVITGLVLDP FASSRLIAFC ALSESRYLNY CVKILKGIEN PNAFSWNVTI RGFSESENPK
DAVLAYKQML RRGCCESRPD HFTYPVLFKV CADLRLNSLG HMILGHVFKL RLELVSHVHN
ASIHMFASCG EMENARKVFD ESPVRDLVSW NCLINGYKKI GEGEKAIEVY KVMESEGVKP
DDVTMIGLVS SCAMLGDLNR GKEFYEYVKA NGLRMTIPLA NALMDMFSKC GDIHEARRIF
DNLEKRTIVS KLFDDMEEKD VVMWNAMIGG SVQAKRSQDA LALFQEMQTS NTDPDEITMI
HCLSACSQLG ALDVGIWIHR YIEKHSLSLN VALGTSLVDM YAKCGNISEA LCVFHGIQTR
NSLTYTAIIG GLALHGDAST AISYFNEMID AGIAPDEITF IGLLSACCHG GMIQTGRDYF
SQMKSRFNLN PQLKHYSIMV DLLGRAGLLE EADKLMESMP MEADAAVWGA LLFGCRMHGN
VKLGEKAAKK LLELDPSDSG IYVLLDGMYG EANMWEDAKR ARRMMNERGV EKIPGCSSIE
VNGIVSEFIV RDKSRPESEK IYDCLHCLGT HMGRSLSVLY SEMRLLRS
//
