ID D7LE23_ARALL Unreviewed; 633 AA.
AC D7LE23;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE SubName: Full=KH domain-containing protein {ECO:0000313|EMBL:EFH54884.1};
GN ORFNames=ARALYDRAFT_481119 {ECO:0000313|EMBL:EFH54884.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH54884.1; -; Genomic_DNA.
DR RefSeq; XP_002878625.1; XM_002878579.1.
DR AlphaFoldDB; D7LE23; -.
DR STRING; 81972.D7LE23; -.
DR EnsemblPlants; fgenesh2_kg.4__179__AT2G22600.1; fgenesh2_kg.4__179__AT2G22600.1; fgenesh2_kg.4__179__AT2G22600.1.
DR Gramene; fgenesh2_kg.4__179__AT2G22600.1; fgenesh2_kg.4__179__AT2G22600.1; fgenesh2_kg.4__179__AT2G22600.1.
DR eggNOG; KOG2190; Eukaryota.
DR HOGENOM; CLU_018025_3_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.310.210; -; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 3.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR PANTHER; PTHR10288:SF269; RNA-BINDING KH DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 5.
DR SMART; SM00322; KH; 5.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 23..118
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 136..210
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 275..348
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 367..439
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 562..631
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 229..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 633 AA; 68198 MW; BC904EB708E5C998 CRC64;
MSNRRGVTTA VSKRRPVIHV LPDETAIRVV CHASVIGGII GSNGYVVSKL RRETGTKIHC
ESPVNGSDHW VVFIVGSTAV NKSVLLTDRV GDFSGGEHED WVTCDVSAAQ TALIRVLERS
WVVLAAKDGG GVVDGEDEEA YCGILADRNQ IGAVLGLGGK NVEWMRRSSG AMIRVLPPPI
CGTNTDELIQ ITGDVLAVKK ALVMVSTCIQ DNPPVNGYPQ PLCIKAYESS TDGNSEDPHS
EFFPNLRSSV PNASDSASSN RHLPAVYDEG NGTERKVVFK IIFTSVVAGG IIGKQGTIIR
ALQNETGASI SIGAPLKVSG ERVVTISARE NLESRYSHAQ NALALVFARS VEIDVEKGLR
PGLHNGAVVK TKLLVPSQFA NSLVGNGNRE AIIATGADVH IPVDNQILEW ISENEVVIEI
KGEYGHVQKA LTHVSSKLRE NLLPKKVLGE MRARVSNPYE SAGTSQIYNL KQSQQNSSRG
DSLSVSDGEQ NFKMVRSGAE VMKLNSVMHT EVLKEVDELK GFTLPQSLLE DDLTQEMKQL
QMSRNGDVSS LPQRRGKGVY VRKITLELTV EKDALGSLYG RDGTGVDNLR QISGAGVDVK
DPTGIEATVL IISGNPEQTR TAMSLIESIL DDQ
//