ID D7LEU3_ARALL Unreviewed; 797 AA.
AC D7LEU3;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH57093.1};
GN ORFNames=ARALYDRAFT_901479 {ECO:0000313|EMBL:EFH57093.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; GL348716; EFH57093.1; -; Genomic_DNA.
DR RefSeq; XP_002880834.1; XM_002880788.1.
DR AlphaFoldDB; D7LEU3; -.
DR STRING; 81972.D7LEU3; -.
DR EnsemblPlants; scaffold_400980.1; scaffold_400980.1; scaffold_400980.1.
DR GeneID; 9315078; -.
DR Gramene; scaffold_400980.1; scaffold_400980.1; scaffold_400980.1.
DR KEGG; aly:9315078; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_9_1; -.
DR OrthoDB; 848162at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF361; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 9.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 243..277
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 316..350
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 386..420
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 421..455
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 456..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 589..623
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 624..658
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 706..740
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 741..775
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 797 AA; 89818 MW; 538EA2A82EB5391D CRC64;
MRFSPTFFLL SQLRLTRRAA TSSRFFAVSA LNNPNNLSDS EQQVNHLNLS KLTQYGLQRL
LNSTRDDPNQ ALSFLRQLKE HDVSPNVNAY ATLVRILTSW GLDRKLDSVL VELIKNEERG
FSVMDLIEVI GEEEAEEDQR SLVLIRVSGA LVKAYVGLGM FDEAIDVLFQ SKRLDCVPDI
KACNFLMNRL IEFGKIGMVV ALFKQLKQLG LCANEYTYAI VVKALCRKGD LEGAAMLLLE
SPSVFSYKTF IDGLCVNGET EKAVVLIEEM IDTNVLVGDD LRTVFCMVVR GFCNEMKMEA
AESVILEMEK IGFGPDVSAC SAIIDRYCKN MNLPEALGFL DKMLGKGLKI NCVIVSSILQ
CYCKMDMCLE ALEKFKEFRD MNIFLDRVCY NVAFDALSKL GRVEEAIELL QEMKDKGIVP
DVINYTTLID GYCLKGKVVD ALDLIDEMIG NGTSPDLITY NVLVSGLARN GHEEAVLEIY
ERMKAEGLKP NAVTDNVIIE GLCFARKVKE AEDFFMSLEQ KCPENKASLV KGYCESGLSK
KAFKLFVTLE YPLRKSVYIK LFFSLCIEGC LDKAHTVLKR MWAYRVEPGR SMCGKMIGAL
CRLNNAIDAQ QLFDTMVERG LIPDLFTYTI MIHTYCRLNE LQKAESLFED MKQRGIKPDV
VTYTVLLDRY LKLDPEHHET GSVQGEVGKR NSELLREFSA SGIGLDVVSY TVLIDRQCKM
DKLEQAAELF DRMIDSGLEP DIVAYTALIS SYFRKGYIDK AVTLVTELSK KYNIPTEHFE
AAVKRAALKA KRFQNGE
//
