ID D7LFR2_ARALL Unreviewed; 425 AA.
AC D7LFR2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=TMS membrane family protein {ECO:0000313|EMBL:EFH57526.1};
GN ORFNames=ARALYDRAFT_482256 {ECO:0000313|EMBL:EFH57526.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TDE1 family.
CC {ECO:0000256|ARBA:ARBA00006665}.
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DR EMBL; GL348716; EFH57526.1; -; Genomic_DNA.
DR RefSeq; XP_002881267.1; XM_002881221.1.
DR AlphaFoldDB; D7LFR2; -.
DR EnsemblPlants; fgenesh2_kg.4__1316__AT2G33205.1; fgenesh2_kg.4__1316__AT2G33205.1; fgenesh2_kg.4__1316__AT2G33205.1.
DR Gramene; fgenesh2_kg.4__1316__AT2G33205.1; fgenesh2_kg.4__1316__AT2G33205.1; fgenesh2_kg.4__1316__AT2G33205.1.
DR eggNOG; KOG2592; Eukaryota.
DR HOGENOM; CLU_029574_1_1_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR005016; TDE1/TMS.
DR PANTHER; PTHR10383:SF23; SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN; 1.
DR PANTHER; PTHR10383; SERINE INCORPORATOR; 1.
DR Pfam; PF03348; Serinc; 2.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 52..68
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 88..114
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 134..156
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 162..182
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 203..225
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 231..249
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 261..279
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 299..321
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 342..364
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 425 AA; 49072 MW; D4107B019D5969BD CRC64;
MNGSAEAATR MRPLQISPGD LEAAHLDELI REIEQRSLFY YQEKNKSLRA RYVYGTIFLI
INLCAWFIRD YAQKALALLP LFVDQKEVIV SIRLEYFAFY VSLTMKIFYF LMFLSTWNTM
KLHEAQNSWH SDNWIFKFFL LVLAMVASFF IPQLYIQIYG EIARVGAGIF LGLQLVSVIE
FITWWNNYWM PHDQSKQSCS FGLVMSIVFY IGSVCGIAVM YYFYAASTAC GLNIFFISWT
VVLLIVMMVM SLHSKVKNRG LLSSGIMASY IVFLCWSAIR SEPSHTKCNA HTQNGHTDWI
TILSFLIAIG AIVMATFSTG IDSESFRFEF RKDEAKEEDD IPYSYGFFHL VFSLGAMYFA
MLFISWNLSH SAQKWSIDVG WTSTWVKIVN EWFGAAIYLW KLIGPIVRQP RVHEQPQPTA
AEVDR
//
