ID D7LJE4_ARALL Unreviewed; 542 AA.
AC D7LJE4;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:EFH56271.1};
GN ORFNames=ARALYDRAFT_483392 {ECO:0000313|EMBL:EFH56271.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348716; EFH56271.1; -; Genomic_DNA.
DR RefSeq; XP_002880012.1; XM_002879966.1.
DR AlphaFoldDB; D7LJE4; -.
DR EnsemblPlants; fgenesh2_kg.4__2452__AT2G42920.1; fgenesh2_kg.4__2452__AT2G42920.1; fgenesh2_kg.4__2452__AT2G42920.1.
DR GeneID; 9316079; -.
DR Gramene; fgenesh2_kg.4__2452__AT2G42920.1; fgenesh2_kg.4__2452__AT2G42920.1; fgenesh2_kg.4__2452__AT2G42920.1.
DR KEGG; aly:9316079; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR OrthoDB; 461553at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 88..122
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 191..221
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 222..256
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 323..357
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 542 AA; 60617 MW; DB45833E05526366 CRC64;
MSPTILCFSG VTVPAIPSSG FVSGNTCLRL IDTRCSTMRE LKQIHANLIK TGLISDTVAA
SRVLAFCCAS PSDRNYAYLV FTRINHKNPF VWNTIIRGFS RSSFPEMAIS IFIDMLCSSP
SVKPQRLTYP SVFKAYASLG LARDGRQLHG RVIKEGLEDD SFIRNTMLHM YVTCGCLVEA
WRLFVGMMGF DVVAWNSIIM GLAKCGLIDQ AQKLFDEMPQ RNGVSWNSMI SGFVRNGRFK
DALEMFREMQ ERDVKPDGFT MVSLLNACAY LGASEQGRWI HKYIVRNRFE LNSIVITALI
DMYCKCGCFE EGLKVFECAP TKQLSCWNSM ILGLANNGCE ERAMDLFLEL ERTGLEPDSV
SFIGVLTACA HSGEVHKAGE FFRLMREKYM IEPSIKHYTC MVNVLGGAGL LDEAEALIKK
MPVEGDTIIW SSLLAACRKN GNVEMAKRAA NCLKNLDPDE TCGYVLMSNA YASYGLFEEA
VEQRLLMKER QMEKEVGCSS IEVDFEVHEF VSCGKKHPKS TEIYSLLGIL NWDVSTIKSG
FA
//
