ID D7LK18_ARALL Unreviewed; 69 AA.
AC D7LK18;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 75.
DE SubName: Full=60S ribosomal protein L38 {ECO:0000313|EMBL:EFH58164.1};
GN ORFNames=ARALYDRAFT_486421 {ECO:0000313|EMBL:EFH54536.1},
GN ARALYDRAFT_903733 {ECO:0000313|EMBL:EFH58164.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|EMBL:EFH58164.1}
RP NUCLEOTIDE SEQUENCE.
RG US DOE Joint Genome Institute (JGI-PGF);
RA Ottilar R., Schmutz J., Salamov A., Cheng J.F., Lucas S., Pitluck S.,
RA Gundlach H., Guo Y., Haberer G., Nasrallah J., Mayer K.F.X.,
RA van de Peer Y., Weigel D., Grigoriev I.V.;
RL Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EFH58164.1}
RP NUCLEOTIDE SEQUENCE.
RG US DOE Joint Genome Institute (JGI-PGF);
RA Bakker E., Bergelson J., Cheng J.Fang., Clark R.M., Fawcett J., Gaut B.,
RA Grigoriev I., Gundlach H., Guo Y., Haberer G., Hollister J., Hu T.T.,
RA Mayer K.F.X., Nasrallah J., Nordborg M., Otillar R., Pattyn P., Schmutz J.,
RA Spannagl M., van de Peer Y., Wang X., Weigel D., Yang L.;
RT "The basis of rapid genome size change in Arabidopsis.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL38 family.
CC {ECO:0000256|ARBA:ARBA00007803, ECO:0000256|RuleBase:RU003445}.
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DR EMBL; GL348717; EFH54536.1; -; Genomic_DNA.
DR EMBL; GL348716; EFH58164.1; -; Genomic_DNA.
DR RefSeq; XP_002878277.1; XM_002878231.1.
DR RefSeq; XP_002881905.1; XM_002881859.1.
DR AlphaFoldDB; D7LK18; -.
DR SMR; D7LK18; -.
DR STRING; 81972.D7LK18; -.
DR EnsemblPlants; fgenesh2_kg.5__2413__AT3G59540.1; fgenesh2_kg.5__2413__AT3G59540.1; fgenesh2_kg.5__2413__AT3G59540.1.
DR EnsemblPlants; scaffold_403234.1; scaffold_403234.1; scaffold_403234.1.
DR GeneID; 9316113; -.
DR Gramene; fgenesh2_kg.5__2413__AT3G59540.1; fgenesh2_kg.5__2413__AT3G59540.1; fgenesh2_kg.5__2413__AT3G59540.1.
DR Gramene; scaffold_403234.1; scaffold_403234.1; scaffold_403234.1.
DR KEGG; aly:9316113; -.
DR eggNOG; KOG3499; Eukaryota.
DR HOGENOM; CLU_152057_2_0_1; -.
DR OrthoDB; 242478at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:EnsemblPlants.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.720.90; -; 1.
DR InterPro; IPR002675; Ribosomal_eL38.
DR InterPro; IPR038464; Ribosomal_eL38_sf.
DR PANTHER; PTHR10965; 60S RIBOSOMAL PROTEIN L38; 1.
DR PANTHER; PTHR10965:SF0; 60S RIBOSOMAL PROTEIN L38; 1.
DR Pfam; PF01781; Ribosomal_L38e; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU003445};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000256|RuleBase:RU003445}.
SQ SEQUENCE 69 AA; 8122 MW; 4E9D685EFACA6E0F CRC64;
MPKQIHEIKD FLLTARRKDA RSVKIKRSKD IVKFKVRCSR YLYTLCVFDQ EKADKLKQSL
PPGLSVQDL
//
