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Database: UniProt
Entry: D7LNW2_ARALL
LinkDB: D7LNW2_ARALL
Original site: D7LNW2_ARALL 
ID   D7LNW2_ARALL            Unreviewed;       255 AA.
AC   D7LNW2;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   28-JUN-2023, entry version 57.
DE   RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN   ORFNames=ARALYDRAFT_484697 {ECO:0000313|EMBL:EFH51765.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
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DR   EMBL; GL348717; EFH51765.1; -; Genomic_DNA.
DR   RefSeq; XP_002875506.1; XM_002875460.1.
DR   AlphaFoldDB; D7LNW2; -.
DR   STRING; 81972.D7LNW2; -.
DR   EnsemblPlants; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2.
DR   Gramene; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2.
DR   eggNOG; ENOG502QSWX; Eukaryota.
DR   HOGENOM; CLU_090819_0_0_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:EnsemblPlants.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR027370; Znf-RING_euk.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   PANTHER; PTHR46616:SF2; OS03G0211100 PROTEIN; 1.
DR   PANTHER; PTHR46616; UBIQUITIN-PROTEIN LIGASE; 1.
DR   Pfam; PF13445; zf-RING_UBOX; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00175}.
FT   TRANSMEM        190..214
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        220..243
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          46..101
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
SQ   SEQUENCE   255 AA;  29213 MW;  789A322B170AC7B6 CRC64;
     MWNLASSYLT GNIGPKNEIR RPVHAHAECS DDDVSSVGSK DEGLECPICW ESFNIVENVP
     YVLWCGHTMC KNCILGLQWA IVKLPTHPVQ LPLFISCPWC NLLSFRLVFR GTLRFPHKNY
     FVLWMVERMN GERRNSPVIA QNDGNNNHTR ETPSPCLHNR HHCSQPEPSR SVNDHRIPRD
     NIQTSLRKSL VFFVQLTAKF PLVVIFLLII LYAIPTSAAI LAMYILVTLL LALPSFLILY
     FAYPCLDWLV REIVT
//
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