ID D7LNW2_ARALL Unreviewed; 255 AA.
AC D7LNW2;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 28-JUN-2023, entry version 57.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=ARALYDRAFT_484697 {ECO:0000313|EMBL:EFH51765.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348717; EFH51765.1; -; Genomic_DNA.
DR RefSeq; XP_002875506.1; XM_002875460.1.
DR AlphaFoldDB; D7LNW2; -.
DR STRING; 81972.D7LNW2; -.
DR EnsemblPlants; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2.
DR Gramene; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2; fgenesh2_kg.5__689__AT3G29270.2.
DR eggNOG; ENOG502QSWX; Eukaryota.
DR HOGENOM; CLU_090819_0_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:EnsemblPlants.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46616:SF2; OS03G0211100 PROTEIN; 1.
DR PANTHER; PTHR46616; UBIQUITIN-PROTEIN LIGASE; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 190..214
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 220..243
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 46..101
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 255 AA; 29213 MW; 789A322B170AC7B6 CRC64;
MWNLASSYLT GNIGPKNEIR RPVHAHAECS DDDVSSVGSK DEGLECPICW ESFNIVENVP
YVLWCGHTMC KNCILGLQWA IVKLPTHPVQ LPLFISCPWC NLLSFRLVFR GTLRFPHKNY
FVLWMVERMN GERRNSPVIA QNDGNNNHTR ETPSPCLHNR HHCSQPEPSR SVNDHRIPRD
NIQTSLRKSL VFFVQLTAKF PLVVIFLLII LYAIPTSAAI LAMYILVTLL LALPSFLILY
FAYPCLDWLV REIVT
//