ID D7LPC7_ARALL Unreviewed; 952 AA.
AC D7LPC7;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 67.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFH51843.1};
GN ORFNames=ARALYDRAFT_905380 {ECO:0000313|EMBL:EFH51843.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348717; EFH51843.1; -; Genomic_DNA.
DR RefSeq; XP_002875584.1; XM_002875538.1.
DR AlphaFoldDB; D7LPC7; -.
DR STRING; 81972.D7LPC7; -.
DR EnsemblPlants; scaffold_501084.1; scaffold_501084.1; scaffold_501084.1.
DR GeneID; 9311652; -.
DR Gramene; scaffold_501084.1; scaffold_501084.1; scaffold_501084.1.
DR KEGG; aly:9311652; -.
DR eggNOG; KOG1274; Eukaryota.
DR HOGENOM; CLU_004219_4_0_1; -.
DR OrthoDB; 3686044at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0061087; P:positive regulation of histone H3-K27 methylation; IEA:EnsemblPlants.
DR GO; GO:0009733; P:response to auxin; IEA:EnsemblPlants.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR048591; Ctf4-like_C.
DR InterPro; IPR022100; Mcl1_mid.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19932; WD REPEAT AND HMG-BOX DNA BINDING PROTEIN; 1.
DR PANTHER; PTHR19932:SF10; WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF20946; Ctf4_C; 1.
DR Pfam; PF12341; Mcl1_mid; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 58..99
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 142..183
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 202..288
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 234..275
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 431..713
FT /note="Minichromosome loss protein Mcl1 middle region"
FT /evidence="ECO:0000259|Pfam:PF12341"
FT DOMAIN 729..825
FT /note="DNA polymerase alpha-binding protein Ctf4-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20946"
FT REGION 350..370
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 385..438
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 847..866
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 917..952
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 414..431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 924..938
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 952 AA; 105133 MW; F2C18A3621332822 CRC64;
MKSRSLKLRE AHKVGGSAAF CSILWDHKAE HFVTSSSTDP SISVHDGLTP STLPPTILRH
HQDGVTALAL SNDSTFLASG SIDHCVKLYK FPSGEFQTNI TRFTLPIRVL AFNGSGSLLA
AAGDDEGIKL INTFDGSIVR VLKGHKGPVT GLDFHPNGEL LASIDTTGTV LCWELQNGIV
SFTLKGVAPD TGFNTSIVNI PRWSPDGRIL AVPGLRNDVV MYDRFTGEKL FALRGDHLEA
ICYLTWAPNG KYIATSGLDK QVLLWDVDKK QDIDRQKFEE RICCMAWKPN CNALSVIDTK
GKYGIWESLV PSSMLSPTVG VPDILPKKRN EILNFDEEIE EEIYRASESL DDAMGDSDDG
ESHHASRKRL RKKTLIDDDV DAYEELNDGS SLPSASENRK KSHRAHREKQ GARSGAFKST
SASTKYKMQS PFQPGATPLE PGKRTFLCYN ILGCITTIEH EGNSRIETDF HDTGRGPRVS
SMIDIYGFTM ASINESGCVF ANPCKGEKNM SVLMYRPFRS WASNSEWTMR FEGEEVKVVA
NGSGWVAAVT SLNLLRIFSE GGLQKHILSL DGPVVTAVGC KDHLAVVTHV SECLPSNEQV
MEFRVFNISK MTQELKGRVA LTPGSRLTWI GFSDEGSLSS YDSEGVLRVF TSQYGGSWIP
VFSTSKEKKQ EENYWVVGLN TTSLYCIACK YPEIFPQVTP KPILTILDLS LPLASSDLGA
ASLENELMLK QLLLYETQRR VDDMALVGVD TTALEDEAFD LEVSQDKCIL RLISSCCSSD
SFVRASELMK LLTLEKSMRA AITLVTKLKL PFLAEKFSSI LEERLLEEAN EAITDPSENP
NREVVTRVES KVQNPPASIQ TSESTEAVMK SSATKLCATT LVRKAKVSEG LKLGKEQTKK
DETEDAKIKE IKKLNLKNPV NNVNKEDKGQ KKEVNQGEAR RSSNPFLKST VK
//
