GenomeNet

Database: UniProt
Entry: D7LRI5_ARALL
LinkDB: D7LRI5_ARALL
Original site: D7LRI5_ARALL 
ID   D7LRI5_ARALL            Unreviewed;      1613 AA.
AC   D7LRI5;
DT   10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT   10-AUG-2010, sequence version 1.
DT   13-SEP-2023, entry version 57.
DE   RecName: Full=BAH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=ARALYDRAFT_485166 {ECO:0000313|EMBL:EFH53853.1};
OS   Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN   [1] {ECO:0000313|Proteomes:UP000008694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX   PubMed=21478890; DOI=10.1038/ng.807;
RA   Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA   Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA   Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA   Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA   Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA   Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT   "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT   change.";
RL   Nat. Genet. 43:476-481(2011).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR   EMBL; GL348717; EFH53853.1; -; Genomic_DNA.
DR   RefSeq; XP_002877594.1; XM_002877548.1.
DR   STRING; 81972.D7LRI5; -.
DR   EnsemblPlants; fgenesh2_kg.5__1158__AT3G48060.1; fgenesh2_kg.5__1158__AT3G48060.1; fgenesh2_kg.5__1158__AT3G48060.1.
DR   Gramene; fgenesh2_kg.5__1158__AT3G48060.1; fgenesh2_kg.5__1158__AT3G48060.1; fgenesh2_kg.5__1158__AT3G48060.1.
DR   eggNOG; KOG1886; Eukaryota.
DR   HOGENOM; CLU_001647_0_0_1; -.
DR   Proteomes; UP000008694; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR   CDD; cd00183; TFIIS_I; 1.
DR   Gene3D; 2.30.30.490; -; 1.
DR   Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR   InterPro; IPR001025; BAH_dom.
DR   InterPro; IPR043151; BAH_sf.
DR   InterPro; IPR003617; TFIIS/CRSP70_N_sub.
DR   InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR   InterPro; IPR017923; TFIIS_N.
DR   PANTHER; PTHR46548; BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR   PANTHER; PTHR46548:SF1; BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR   Pfam; PF01426; BAH; 1.
DR   Pfam; PF08711; Med26; 1.
DR   SMART; SM00439; BAH; 1.
DR   SMART; SM00509; TFS2N; 1.
DR   SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR   PROSITE; PS51038; BAH; 1.
DR   PROSITE; PS51319; TFIIS_N; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00649}; Reference proteome {ECO:0000313|Proteomes:UP000008694}.
FT   DOMAIN          49..164
FT                   /note="BAH"
FT                   /evidence="ECO:0000259|PROSITE:PS51038"
FT   DOMAIN          326..412
FT                   /note="TFIIS N-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51319"
FT   REGION          188..261
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          412..651
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          718..746
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          786..874
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1076..1123
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1340..1360
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1591..1613
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        188..222
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        223..248
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        439..496
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        510..533
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        540..615
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        726..746
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        791..817
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        827..855
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        856..874
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1082..1109
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1613 AA;  171984 MW;  C9E2247776BE6609 CRC64;
     MHGRVCERRH KSRRRHMLIS SSRVIATVEG GGSSCLSLSS STSFSKDGRK ISVGDCALFK
     PPQDCPPFIG IIRLIIAEKE GKLKLGVNWL YRPTELKLGK GTLLEAEPNE LFYSFHEDNI
     PAASLLHPCK VAFLPRGVEL PSGICSFVCR RVYDVTNERL WWLTDQDYID DRQLEVDKLL
     CKTRSEMHTT LQQGGRSPKS MNSPTTSQAK DGIQNNNSFL SQGKGRKRER MDHGSESVKR
     ERSSRVDDSG SGPLRTESGL KSEISKFTEK GGLVDSEGVE KLLQLMLPER NEKKIDLIGR
     AILAGVVAAT DKFDCLSRFV QLRGLPVFDE WLQEVHKGKV GDGGSPKDSD RLVDDFLLVL
     LRALDKLPVN LNALQTCNIG KSVNHLRSHK NSEIGKKARS LVDTWKKRVE AEMDAKSGSN
     QGVSWPGRLS HGGRHSGGSA EANKTSSSHL HASKSVSVKQ QVENNLKCVA TSPGSTRSAP
     SPGSGGTISK DGQQRNAGAG GVSEVLAAVK DEKSSSSSQS HNNSQSCSSE HAKTGNLCGK
     EDARSSTAGS TLKKCSGGSS RHRKSNNVFQ GSSSSASPRE AGFSRSFSSQ RNVPSEKISQ
     SSLTSEKTLE VPLTESSGNK LIVKLPNRGR SPAQSVSGGS LEDPAPVNSR VSSPVHAVKQ
     ELCDNNVREK NHSYRANVSS VLNAESWQSN ELKDILTGSQ EAAGSPLVVA GDERGGALKD
     SDKAAGNVKG TSSLGNDFKS GERHGGTLSS MNALIESCVR YSETNASLAG SDDVGINLLA
     SVAADEMSKS PVASPSVSQP PNSLMNENST VGNNTKLIAS DGLPHEQHQA ARTTVSNEQG
     EQHVSSSGTQ LESEIKNESK TGDRDKSSNS ETEDLQRLVD KRLENNDNSD GAVASPVLPT
     KAIKEKILDD SDSGEVKDIK ADVKSEADCT SDSTKRVASS MLTECRDVSQ KVDSVAVEHT
     PLDRVDDKKE EKPPTALSSE LVKKVEEDVP VSSGISRGMD AVSIDRPITE MVNNMAVNHI
     DQKDIKKIKQ DCDAFVGAIK DASAGLDSSV TKGKVEPVEG NLENIKVKER CLGLKATPGV
     SPKDAEDLKR PNGPKTSDAD GDEAEECTSA ARDASSVSAA ASAGSEMDAR VEFDLNEGFD
     GDDAKHGDSN NFSGSVFLTP TPLQPVNTLP FPVAPVSSGI PASITVAAAA KGPFVPPEDL
     LRNKGAVGWR GSAATSAFRP AEPRKAQDVL LSINNTSTSD ASTSAGKQTR TFLDFDLNVP
     DERVLEDLAS QRTGIATNCT SGITNSFDQV RSGVMGSALD HSSGGLDLDL NKVDDSTDMN
     NYNMSSSHRL DSSFQHVKLP STGGRRDFDL NDGPAGDDAA VEPSMVLNQH SRSGLPSQPS
     LSGIRVNGEN MASFSTWFPA ANAYSAVSIP PIMPERGDQP FPMIANRGPQ RMLGPTTGVS
     SFAPEGYRGP VLSSSPAMPF QSTTFQYPVF PFGNSFPITS ANFSGASTTH MDSSSSGRAC
     FPGVNSQILG PGVPVPSNYP RPYIVGLPNG GSNGGVLDNS AKWFRSGLDL NSGPGGHETE
     GRDESTLVAR QLSSSASLPL KEDQARMYQM SGGVLKRKEP EGGWDGYRQS SWQ
//
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