ID D7LUF9_ARALL Unreviewed; 810 AA.
AC D7LUF9;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFH52454.1};
GN ORFNames=ARALYDRAFT_485698 {ECO:0000313|EMBL:EFH52454.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
CC -!- SIMILARITY: Belongs to the AAA ATPase family.
CC {ECO:0000256|ARBA:ARBA00006914}.
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DR EMBL; GL348717; EFH52454.1; -; Genomic_DNA.
DR RefSeq; XP_002876195.1; XM_002876149.1.
DR AlphaFoldDB; D7LUF9; -.
DR STRING; 81972.D7LUF9; -.
DR EnsemblPlants; fgenesh2_kg.5__1690__AT3G53230.1; fgenesh2_kg.5__1690__AT3G53230.1; fgenesh2_kg.5__1690__AT3G53230.1.
DR Gramene; fgenesh2_kg.5__1690__AT3G53230.1; fgenesh2_kg.5__1690__AT3G53230.1; fgenesh2_kg.5__1690__AT3G53230.1.
DR eggNOG; KOG0730; Eukaryota.
DR HOGENOM; CLU_000688_12_0_1; -.
DR OrthoDB; 168438at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0005654; C:nucleoplasm; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0045732; P:positive regulation of protein catabolic process; IEA:EnsemblPlants.
DR CDD; cd19519; RecA-like_CDC48_r1-like; 1.
DR CDD; cd19528; RecA-like_CDC48_r2-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.40.40.20; -; 1.
DR Gene3D; 3.10.330.10; -; 1.
DR Gene3D; 6.10.20.150; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR005938; AAA_ATPase_CDC48.
DR InterPro; IPR041569; AAA_lid_3.
DR InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR003960; ATPase_AAA_CS.
DR InterPro; IPR004201; Cdc48_dom2.
DR InterPro; IPR029067; CDC48_domain_2-like_sf.
DR InterPro; IPR003338; CDC4_N-term_subdom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR01243; CDC48; 1.
DR PANTHER; PTHR23077; AAA-FAMILY ATPASE; 1.
DR PANTHER; PTHR23077:SF180; CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D; 1.
DR Pfam; PF00004; AAA; 2.
DR Pfam; PF17862; AAA_lid_3; 2.
DR Pfam; PF02933; CDC48_2; 1.
DR Pfam; PF02359; CDC48_N; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01072; CDC48_2; 1.
DR SMART; SM01073; CDC48_N; 1.
DR SUPFAM; SSF50692; ADC-like; 1.
DR SUPFAM; SSF54585; Cdc48 domain 2-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00674; AAA; 2.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 30..113
FT /note="CDC48 N-terminal subdomain"
FT /evidence="ECO:0000259|SMART:SM01073"
FT DOMAIN 130..196
FT /note="CDC48"
FT /evidence="ECO:0000259|SMART:SM01072"
FT DOMAIN 241..377
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 514..653
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 772..810
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 810 AA; 89937 MW; BCAF3C1DB2A8A2FB CRC64;
MANQAESSDS KGTKRDFSTA ILERKKAANR LVVDEAINDD NSVVSLHPET MEKLQLFRGD
TVLIKGKKRK DTVCIALADD TCDEPKIRMN KVVRSNLRVR LGDVISVHQC PDVKYGKRVH
ILPIDDTIEG VSGNIFDAYL KPYFLEAYRP VRKGDLFLVR GGMRSIEFKV IETDPAEYCV
VAPDTEIFCE GEPIKREDEE RLDEVGYDDV GGVRKQMAQI RELVELPLRH PQLFKSIGVK
PPKGILLYGP PGSGKTLIAR AVANETGAFF FCINGPEIMS KLAGESESNL RKAFEEAEKN
APSIIFIDEL DSIAPKREKT HGEVERRIVS QLLTLMDGLK SRAHVIVMGA TNRPNSIDPA
LRRFGRFDRE IDIGVPDEIG RLEVLRIHTK NMKLAEDVDL ERVSKDTHGY VGADLAALCT
EAALQCIREK MDVIDLDDEE IDAEILNSMA VTNDHFQTAL GNSNPSALRE TVVEVPNVSW
EDIGGLENVK RELQETVQYP VEHPEKFEKF GMSPSKGVLF YGPPGCGKTL LAKAIANECQ
ANFISIKGPE LLTMWFGESE ANVREIFDKA RQSAPCVLFF DELDSIATQR GNSVGDAGGA
ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDPALLRP GRLDQLIYIP LPDEESRYQI
FKSCLRKSPV AKDVDLRALA KYTQGFSGAD ITEICQRSCK YAIRENIEKD IEKERKRAES
PEAMEEDEEE IAEIKAGHFE ESMKYARRSV SDADIRKYQA FAQTLQQSRG FGSEFRFPDA
PTGTGAAATV GGVDPFATSG GAADDDDLYS
//
