ID D7LYU3_ARALL Unreviewed; 192 AA.
AC D7LYU3;
DT 10-AUG-2010, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 1.
DT 24-JAN-2024, entry version 54.
DE SubName: Full=PHD finger family protein {ECO:0000313|EMBL:EFH50916.1};
GN ORFNames=ARALYDRAFT_327250 {ECO:0000313|EMBL:EFH50916.1};
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972 {ECO:0000313|Proteomes:UP000008694};
RN [1] {ECO:0000313|Proteomes:UP000008694}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47 {ECO:0000313|Proteomes:UP000008694};
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
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DR EMBL; GL348718; EFH50916.1; -; Genomic_DNA.
DR RefSeq; XP_002874657.1; XM_002874611.1.
DR AlphaFoldDB; D7LYU3; -.
DR STRING; 81972.D7LYU3; -.
DR EnsemblPlants; fgenesh1_pm.C_scaffold_6002470; fgenesh1_pm.C_scaffold_6002470; fgenesh1_pm.C_scaffold_6002470.
DR Gramene; fgenesh1_pm.C_scaffold_6002470; fgenesh1_pm.C_scaffold_6002470; fgenesh1_pm.C_scaffold_6002470.
DR eggNOG; ENOG502QS0G; Eukaryota.
DR HOGENOM; CLU_1416940_0_0_1; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR47177; F18C1.6 PROTEIN; 1.
DR PANTHER; PTHR47177:SF3; F18C1.6 PROTEIN; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008694};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 31..70
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 192 AA; 21512 MW; 4C09B336AE215B42 CRC64;
MELDFDVSNL VEDEAAEVEH NDMAGIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS
TIMNLCPLCQ REFQLITCVP VYDSGESSKV DEVSLSGDED CCIEEETDAV SSPSHYIDET
HYIDENAVIC LDGDLCKLRN TFSYIGGDSN LDTSIACDSC DTWYHAICVG FDVENASEDT
WVCPSIDTLY QI
//
